Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0912 ATGTATGGGGATTGTCAAGTGATGTCAAGCATGGGAAGTAACGTAGTAGTAAACTCAGAAACGCTCTTCTCTTCTACAATCCAAAACTCCAGCTTCAACTTCATACCCACCATTCCTTTTCAACCTTTTCAACCTCCCATGGAAGAAGAAGAGGGGATGATGATGAGAGGGAAGGAAGAGATCATGGAGAGCGGTTCTGGTAGCGAACAAGACAACAAGTCAGGGAACGAGCAAGACAATGAACAACCAGCCAACAAGAAGAAACGTTACCACAGGCACACTGCTCGTCAGATCCAAGAAATGGAAGCTTTGTTCAAGGAATGTCCTCACCCAGACGACAAACAAAGGATGAAACTGAGCCAAGATCTGGGCTTGAAGCCACGCCAAGTCAAGTTCTGGTTTCAAAATCGTCGAACTCAGATGAAGGCGCAACATGATAGAGCTGATAATGTGATACTGAGAGCAGAAAATGAGAACCTGAAGAATGAGAACTATCGTCTACAAGCAGCTCTGCGTAATGTGATGTGTCCCAATTGCGGTCCGGCGATGATGGATGTTGAACTGGGCATGGATGAGCATCAGCTTCGCCTTGAAAATGTTCGCCTCAGGGAAGAGTTAGAACGCGTGTGTTGTCTGACATCAAGATACACAGGCCGTGCAATGCAAACAATGGCGTCGCCCGCTCCTCCTCTGTTGGCTCCTTCATTGGACTTAGACATGAACATATACTCAAGGCACTTTTCTGATCCTGTTGCCTCTTGTACTTCCGAGATGATTCCTGTCCCAATGTTGCCGCCTCCTCCTTCCGATACTCCGCCGTTCCCTGACGGTGGCCTGTTGTTGATGGAAGAGGACAAGTCTCTGGCATTGGAGCTCGCTGTGTCGTCCATGGATGAACTCATCAAGATGTGTCAGGCAAACGAGCCGCTTTGGATCAGAGACAGTGAGAATATTGATAGGGAAATGCTGAATTTTGAGGAGCATGCTAGGCTCTTTCATTGGCCTCTCAACCTCAAGAACCATTGTACTGAACTCAGAAGAGAAGCTAGCCGTAACACTGCTGTCGTTATAATGAACAGCGTCACTCTTGTTGACGCCTTCCTTGATGCTATGAAGTGGATGGAATTGTTCCCCACCATTGTTTCTAGGGCAAAAACTGTACAAATTATATCGTCTGGTGCTTCTGGTCATGCAAGTGGGTCTCTTCAACTGATATACGCAGAATTACAAGTGATTTCTCCATTGGTGCCCACTCGTGAGACTCACTTTCTTCGTTACTGCCAACAAAACGCCGAGGAGGGAACCTGGGCCATTGTTGATTTTCCTCTCGACAGCTTCCATGAAAATTTTCACCATTCTTATCCCAGATACTGCAGGCGACCCTCTGGCTGTATTATTCAAGACATGCCAAATGGCTACTCAAGGGTCACGTGGGTGGAGCATGCAGAGGTGGAAGAGAAACCAGTGCATCAGATATTCAGTAACTATGTGTACAGTGGAATGGCATTTGGAGCACAGCGTTGGTTAGGGGTTTTGCGGAGGCAATGTGAGAGGGTCGCCAGTCTCATGGCAAGGAATATCTCAGACCTTGGAGTGATACCGTCACCAGAAGCTAGAAAGAACTTGATGAAACTGGCGCAAAGGATGATAAGAACGTTTAGCTTGAACATGAGCACGTCGAGTGGACAATCATGGACTGCGTTATCAGATTCTGCAGAAGACACTGTTAGAATTACAACGAGGAAGATTACAAACCCAGGGCAACCTAATGGGGTCATACTCAGTGCAGTATCCACCACATGGCTTCCTTATTCTCACTCCAAGGTCTTTGACCTTCTCAAGGACGAACGTCGCAGATCTCAGTTGGATTTTCTGTCCAATGGGAACTCTTTGCATGAAGTGGCTCATATTGCAAATGGCTCACATCCAGGAAATTGCATCTCGCTTTTGCGTGTAAACGTGGCAAGCAACTCATCTCAGAACGTAGAGTTAGTGGTGCGAGAGAGCTGCACTGATCAGTCGGGGAGTCTAGTGGTGTACGCCACCATTGACGTGGAATCCATCCAGCTCGCCATGTCCGGCGAGGACCCTTCCTCCATAGCACTTCTTCCCCAAGGCTTCGTAATCGTTCCTGCAACAACCTCCGCCGCAGCCGCCAATGCCAATTCAACTGAATCCCCCGCCACCGCGGGAGCACCACCTTCTTCTACTACTCTGAACCAATCTTGTCTTCTCACATTGGGCCTCCAAGTCCTGGCCAGTACCATCCCTTCAGCGAAACTCAACCTCTCCAGCGTCACCGCCATTAACAACCATCTCTGCAACACTCTCCACCAAATCGAAGCCGCTCTTTGCACTGACGATTCCACTTATGTCGCTGAACCCACCACCACCACTGCAACCACCCCTAAGCAATAG 2418 0.4843 MYGDCQVMSSMGSNVVVNSETLFSSTIQNSSFNFIPTIPFQPFQPPMEEEEGMMMRGKEEIMESGSGSEQDNKSGNEQDNEQPANKKKRYHRHTARQIQEMEALFKECPHPDDKQRMKLSQDLGLKPRQVKFWFQNRRTQMKAQHDRADNVILRAENENLKNENYRLQAALRNVMCPNCGPAMMDVELGMDEHQLRLENVRLREELERVCCLTSRYTGRAMQTMASPAPPLLAPSLDLDMNIYSRHFSDPVASCTSEMIPVPMLPPPPSDTPPFPDGGLLLMEEDKSLALELAVSSMDELIKMCQANEPLWIRDSENIDREMLNFEEHARLFHWPLNLKNHCTELRREASRNTAVVIMNSVTLVDAFLDAMKWMELFPTIVSRAKTVQIISSGASGHASGSLQLIYAELQVISPLVPTRETHFLRYCQQNAEEGTWAIVDFPLDSFHENFHHSYPRYCRRPSGCIIQDMPNGYSRVTWVEHAEVEEKPVHQIFSNYVYSGMAFGAQRWLGVLRRQCERVASLMARNISDLGVIPSPEARKNLMKLAQRMIRTFSLNMSTSSGQSWTALSDSAEDTVRITTRKITNPGQPNGVILSAVSTTWLPYSHSKVFDLLKDERRRSQLDFLSNGNSLHEVAHIANGSHPGNCISLLRVNVASNSSQNVELVVRESCTDQSGSLVVYATIDVESIQLAMSGEDPSSIALLPQGFVIVPATTSAAAANANSTESPATAGAPPSSTTLNQSCLLTLGLQVLASTIPSAKLNLSSVTAINNHLCNTLHQIEAALCTDDSTYVAEPTTTTATTPKQ 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0912 805 CDD homeodomain 87 145 IPR001356 GO:0003677
Lele51g0912 805 ProSitePatterns 'Homeobox' domain signature. 119 142 IPR017970 GO:0000981|GO:0006355
Lele51g0912 805 Gene3D - 71 155 - -
Lele51g0912 805 Coils Coil 138 173 - -
Lele51g0912 805 ProSiteProfiles 'Homeobox' domain profile. 84 144 IPR001356 GO:0003677
Lele51g0912 805 Pfam Homeodomain 87 142 IPR001356 GO:0003677
Lele51g0912 805 CDD START_ArGLABRA2_like 286 517 - -
Lele51g0912 805 ProSiteProfiles START domain profile. 282 521 IPR002913 GO:0008289
Lele51g0912 805 SMART HOX_1 85 148 IPR001356 GO:0003677
Lele51g0912 805 SMART START_1 291 518 IPR002913 GO:0008289
Lele51g0912 805 MobiDBLite consensus disorder prediction 60 94 - -
Lele51g0912 805 FunFam Homeobox-leucine zipper protein HDG1 74 160 - -
Lele51g0912 805 Gene3D - 337 509 IPR023393 -
Lele51g0912 805 SUPERFAMILY Bet v1-like 554 781 - -
Lele51g0912 805 Pfam START domain 292 518 IPR002913 GO:0008289
Lele51g0912 805 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 82 784 IPR042160 -
Lele51g0912 805 SUPERFAMILY Homeodomain-like 70 144 IPR009057 -
Lele51g0912 805 SUPERFAMILY Bet v1-like 283 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0912 Lele-ChrLele51 5664078 5668799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0912 8 793 Homeobox Transcription Factor Family AT5G46880 56.706 0.0 864
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele51g0912 START 1.6e-42 CL0209