Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0911 ATGCTTCGAAGGGGTTTTTTCACTTTACATTACAGAACTGACCTGGCCGCTCCCACAGATTCCAGGGAATTTGCGGTTTACCTCTGGGATTTGGATATAGTTTGTGATTGTTTTCGCGATTTCTCCTTCAAGTGTGTAAAGCCGGAGACCTACAAGGAGCGACTTCGTAATGAAATGGTGGAAAGAAGACTTTCTTTATCTAAGGAAGCTAGACATGGGCTAGAATTTTTGAAGCGTAAAAGGCTTCAACGGGCAAAACTCATTACTGCCTCAGAAACAACTGTTGCTAGCACAATGACTAGAAGCGGAGGAGATGCTTTAAGAGCTTCAGCTTCGTGTGTTGGTGGTGTCAGATTTCATGGCAATGCAGACGTCTTCTCAAAGCGGAAGGTGGATAAGTTTGAGACAAGTGATCTTGAATGGACTGAGAAAATTCCAGAATGTCCTGTTTATTGTCCAACAAAGGAGGAATTTGAGGATCCTCTGGTTTACTTGCAAAAGATAGCTCCAGAAGCTTCAAAATATGGTATATGCAAGATTATTTCACCTCTGAGTGCGTCTGTTCCTGCTGGAGTTGTTTTAATGAAGGAGAAGGCGGGATTCAAGTTTACAACTAGAGTACAGCCTCTTCGGCTTGCTGAGTGGGACACTGAAGACAAAGTCACATTTTTCATGAGTGGAAGCAATTATACATTCCGTGATTTTGAGAAAATGGCGAATAGAGTTTTTGCACATAGATATTCTAGTGCTGGATGTCTTCCTGCCACATTTTTGGAAAAGGAGTTTTGGCATGAAATTGCTTGTGGACAGATGGAAACTGTTGAATATGCATGTGATGTTGATGGTAGTGCTTTTTCATCTTCTCCTACCGATCAGCTTGGGAACAGCAAATGGAATTTAAAGAAAGTTTCACGGTTGCCCAAGTCCGTTTTGCGCCTCTTGGAAACAGCAATTCCGGGAGTAACAGAACCCATGCTGTACATTGGAATGCTCTTTAGTATGTTTGCTTGGCATGTGGAGGATCATTATTTGTACAGTATAAATTATCAACACTGTGGTGCATCAAAAACTTGGTACGGCATTCCAGGTCATGCAGCATTGGATTTTGAAAGGGTGGTGAGAGAGCATGTGTACTCTAAAGATATTCTTTCTAATGATGGGGAGGATGGAGCTTTTGATGTTCTTCTGGGGAAAACAACCCTGTTCCCTCCAAATATTTTGTTGGATAATGAAGTCCCTGTCTATAAGGCTGTTCAAAAGCCAGGGGAGTTTGTAATAACTTTTCCTAGAGCATATCATTCTGGATTTAGTCATGGTTTCAACTGTGGAGAAGCAGTGAACTTTGCAATTGGTGATTGGTTTCCTTTAGGAGCTATTGCTAGCCAGCAATACGCGCTTCTTAACAGGATGCCCCTGCTACCTCATGAAGAACTTCTATGCAAAGAAGCAATGCTCCTTCATACAAACTTAGAACTTGAAGATTCAGACTTTCCCTCTGCAGATCTGTTGGCTCATAATTGCATAAAGATTTCGTTTGTAAATCTAATGCGCTTTCAGCATTGTGTTCGTTGGCTCCTAATGAAATCGAGGTCTTGTTCGAGTGTTTTTCCACATTCCCACACCACAATTCTCTGTAGCCTCTGCAAACGCGATTGTTATGTTGCATATGTAGACTGCAAGTGTCACATGCACCCTGTGTGCCTTTGCCATGATATTGAAGCTCTTGGCTTAACCTGTGGGAGCGAGCACACTCTTTATGTGAGAGAGGATATTAGTGACCTGGAAGCTGCAGCCAAGAGGTTTGAGCAGGGAGATGGAATCGTGGATGAGATTCTTAAGCAAACCAAGGGTGACAATAACATGTATTCATATCCTTTGTCAAATATGTTCCAGAGAGCTGAAGCAAATGGATATACTACTTATTGCGAGATAGAATTTGATCCTGTTATTGAACATTATTCAACCACAGATCAGGCAAGAAGTAGTACAGAGCGCAATTTACGAAGTCAACTTGTTTGGAGGCACTGCCCAGATATTAAACCAGAAGTCTGCGAGGCTTCTTTTTCTTCTGCTGCATCCACCCTGTGTTCTCTTTCAGAACCTATTGATAGGTCTTCTGCTCTCAAAAATGACGATGGGCATGCGTATTTTACTTCTGGCTCTATTGATTCTGAAGAATGTTGTGAAGGAGTATCAAATAGCGCAAACCAATCTTTATTATCCTCTGCGCGCTATCATGAAATCTCAAGTAAACCTCAACGCAATTGCGATGGATTAGAGATGATGCCCATTGTGGATAAAGAGGATAACGATTCTGATTCAGAAATATTTAGGGTAAAGCGGCCGTCTTCTCTGAAGGCAGAGAAGAGAAATTTGAATGCCACCACGTCTTCCAAGCATTCGGACCAACAGGGGCTTAGACGATTGAAGAAAGTCAATGAAGGAAGTAGCCCGCCACAGCCAATGGATTGCAGCAGAAGCGATGATTCAAGTAACAAATTCAATGAGCCGATGAAACGGAAATTTGAGGGTGAAAGATCGGTGAAGGACAAATTTGGAGGGGGAAATAGCATTCCTATATCTGTGAGGTATAAGAAGCTGGGCAATGAGGGAGTTAGCAGGGAGCGAGATCAGCACAAGAATTATAGGGAGCGACCTCCCTTTGAGATGGGGCCCAAGCGCCTTAAAGTGCGAGGCCCTTCGTTCTTGAGCTTAGAGAGTCCTGGTTTTGCCTCTAAATGGTAA 2745 0.427 MLRRGFFTLHYRTDLAAPTDSREFAVYLWDLDIVCDCFRDFSFKCVKPETYKERLRNEMVERRLSLSKEARHGLEFLKRKRLQRAKLITASETTVASTMTRSGGDALRASASCVGGVRFHGNADVFSKRKVDKFETSDLEWTEKIPECPVYCPTKEEFEDPLVYLQKIAPEASKYGICKIISPLSASVPAGVVLMKEKAGFKFTTRVQPLRLAEWDTEDKVTFFMSGSNYTFRDFEKMANRVFAHRYSSAGCLPATFLEKEFWHEIACGQMETVEYACDVDGSAFSSSPTDQLGNSKWNLKKVSRLPKSVLRLLETAIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYQHCGASKTWYGIPGHAALDFERVVREHVYSKDILSNDGEDGAFDVLLGKTTLFPPNILLDNEVPVYKAVQKPGEFVITFPRAYHSGFSHGFNCGEAVNFAIGDWFPLGAIASQQYALLNRMPLLPHEELLCKEAMLLHTNLELEDSDFPSADLLAHNCIKISFVNLMRFQHCVRWLLMKSRSCSSVFPHSHTTILCSLCKRDCYVAYVDCKCHMHPVCLCHDIEALGLTCGSEHTLYVREDISDLEAAAKRFEQGDGIVDEILKQTKGDNNMYSYPLSNMFQRAEANGYTTYCEIEFDPVIEHYSTTDQARSSTERNLRSQLVWRHCPDIKPEVCEASFSSAASTLCSLSEPIDRSSALKNDDGHAYFTSGSIDSEECCEGVSNSANQSLLSSARYHEISSKPQRNCDGLEMMPIVDKEDNDSDSEIFRVKRPSSLKAEKRNLNATTSSKHSDQQGLRRLKKVNEGSSPPQPMDCSRSDDSSNKFNEPMKRKFEGERSVKDKFGGGNSIPISVRYKKLGNEGVSRERDQHKNYRERPPFEMGPKRLKVRGPSFLSLESPGFASKW 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0911 914 Pfam C5HC2 zinc finger 545 596 IPR004198 -
Lele51g0911 914 MobiDBLite consensus disorder prediction 788 802 - -
Lele51g0911 914 MobiDBLite consensus disorder prediction 829 850 - -
Lele51g0911 914 MobiDBLite consensus disorder prediction 868 892 - -
Lele51g0911 914 SUPERFAMILY Clavaminate synthase-like 286 481 - -
Lele51g0911 914 PANTHER LYSINE-SPECIFIC DEMETHYLASE 140 829 - -
Lele51g0911 914 ProSiteProfiles JmjN domain profile. 148 189 IPR003349 -
Lele51g0911 914 SMART cupin_9 292 465 IPR003347 -
Lele51g0911 914 MobiDBLite consensus disorder prediction 766 787 - -
Lele51g0911 914 FunFam Lysine-specific demethylase isoform A 143 492 - -
Lele51g0911 914 ProSiteProfiles JmjC domain profile. 295 465 IPR003347 -
Lele51g0911 914 Pfam jmjN domain 149 181 IPR003349 -
Lele51g0911 914 Pfam JmjC domain, hydroxylase 325 448 IPR003347 -
Lele51g0911 914 SMART JmjN_1 147 188 IPR003349 -
Lele51g0911 914 MobiDBLite consensus disorder prediction 766 895 - -
Lele51g0911 914 Gene3D Cupin 148 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0911 Lele-ChrLele51 5645078 5652411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0911 145 484 JUMONJI Transcription Factor Family AT2G34880 37.343 3.62e-62 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lele51g0911 JmjC 1.6e-38 CL0029