Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0905 ATGGGTAGCGGTGACATGGATAAAACTCCAAAAGAGAAGGAGCCAAAGACACCTCCGGCTATGTCACAGGAGCAGTCTTCAACTCCTGGCACTGGAACAATTAATCCTGATTGGTCCAGCTTTCAGGCATATTCTCCAATGCCTCCACATGGGTTCTTAGCATCAAGTCCCCAAGCTCACCCATATGTGTGGGGTGTCCAGCATATTATGCCTCCTTATGGTACCCCACCACATCCATATGTTGCAATGTATCCTCATGGTGGTATATATGCTCATCCATCTATGCCTTCGGGATCTTATCCTTTTAGTCCTTTTGCCATGCCTTCTCCGAATGGTATTGCTGAGCCTTCAGGCAATACTCTTGGCAACATGGAAACTGATGGTAAGCCTCCTGAGGTGAAGGAAAAATTGCCAATTAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATGTGATTACAGGAAAGAATGTTGAACATAGTAAAACACCAGGGACATCTGCTAATGGAGTTCATTCAAAAAGTGGTGAAAGTGCAAGTGAAGGTACTAGTGAAGGAAGTGATGCAAATTCTCAGAATGACTCTCAGCTGAAATCAGAGGGAAGGAAGGACCCTTTGGGAGCTGAACCATCTCAAAATGGAGGTGCTCCTGGTGGAGTTGGTCCCACAACAAATTTAAATATAGGAATGGATTATTGGGGTGCACCCGCTTCATCCACTATTCCTGCAATGCGTGGAAAGGTTCCTTCTACTGCTGTTGCTGGAGGAATGGTTACTGCTGGATCACGGGAGAGCGTTCAGTCACAACTTTGGCTGCAGGATGAAAGAGAACTAAAGAGACAAAGGCGGAAGCAGTCTAATAGGGAATCAGCTCGCAGGTCTAGGTTGCGCAAGCAGGCTGAATGTGATGAACTAGCCCAGCGAGCAGAGGCTTTAAAAGAAGAGAATGCTTCTCTCCGCTCTGAAGTGAACCGGATAAGGAGTGAGTACGAGCAGCTGCTCTCAGAAAATGCTGCCCTCAAGGAAAAACTTGGGGAATCACCTGAGAATGAGGAGCATAGGCCTAGCCGGAATGGCCAACGTGTGGATAGTGATGTTCAACACACGGAGCAGACAGAAGCCGTGCAGGGCAGTCATTAA 1137 0.4688 MGSGDMDKTPKEKEPKTPPAMSQEQSSTPGTGTINPDWSSFQAYSPMPPHGFLASSPQAHPYVWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSMPSGSYPFSPFAMPSPNGIAEPSGNTLGNMETDGKPPEVKEKLPIKRSKGSLGSLNVITGKNVEHSKTPGTSANGVHSKSGESASEGTSEGSDANSQNDSQLKSEGRKDPLGAEPSQNGGAPGGVGPTTNLNIGMDYWGAPASSTIPAMRGKVPSTAVAGGMVTAGSRESVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVNRIRSEYEQLLSENAALKEKLGESPENEEHRPSRNGQRVDSDVQHTEQTEAVQGSH 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0905 378 MobiDBLite consensus disorder prediction 146 195 - -
Lele51g0905 378 MobiDBLite consensus disorder prediction 19 42 - -
Lele51g0905 378 MobiDBLite consensus disorder prediction 336 378 - -
Lele51g0905 378 SMART brlzneu 274 338 IPR004827 GO:0003700|GO:0006355
Lele51g0905 378 Coils Coil 294 342 - -
Lele51g0905 378 MobiDBLite consensus disorder prediction 1 18 - -
Lele51g0905 378 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 281 296 IPR004827 GO:0003700|GO:0006355
Lele51g0905 378 SUPERFAMILY Leucine zipper domain 277 333 IPR046347 GO:0003700|GO:0006355
Lele51g0905 378 CDD bZIP_plant_GBF1 279 329 IPR045314 GO:0003700|GO:0006355
Lele51g0905 378 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 276 339 IPR004827 GO:0003700|GO:0006355
Lele51g0905 378 MobiDBLite consensus disorder prediction 1 42 - -
Lele51g0905 378 MobiDBLite consensus disorder prediction 116 239 - -
Lele51g0905 378 Gene3D - 277 331 - -
Lele51g0905 378 Pfam Disordered region downstream of MFMR 214 241 - -
Lele51g0905 378 Pfam Disordered region downstream of MFMR 135 214 - -
Lele51g0905 378 Pfam bZIP transcription factor 274 336 IPR004827 GO:0003700|GO:0006355
Lele51g0905 378 MobiDBLite consensus disorder prediction 275 300 - -
Lele51g0905 378 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Lele51g0905 378 MobiDBLite consensus disorder prediction 341 367 - -
Lele51g0905 378 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 362 IPR044827 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0905 Lele-ChrLele51 5566384 5572379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0905 1 375 bZIP Transcription Factor Family AT2G35530 60.827 2.37e-152 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele51g0905 MFMR 7.7e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0905 51 5566384 5572379 Lele51g0905 51 5566384 5572379 ECH
Lele49g0889 49 5494407 5499669 Lele51g0905 51 5566384 5572379 hybridization
Lele50g0931 50 5869442 5874391 Lele51g0905 51 5566384 5572379 hybridization