Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0894 ATGGCAGCTTTCACAGTGTACACAACACAATCTCTCAACACAAATTCCTCCTTCACAACCCCATCAAAATCCCACTTGGGTTTTCACCAAAAACAGGTTCTTTTCTACAGAAGCAAAACCGGCAGCAGAAGTAACAGCAGCAGCAGACCATGGGTGATAACATGCTCTGCAGGTGACTCACAGACAGTGGTGATTGGTCTAGCAGCAGACTCTGGATGTGGGAAGAGTACCTTCATGAGAAGACTTACCAGTGTGTTTGGAGGAAAAGCAGAACCACCGAAAGGAGGGAATCCAGATTCCAACACACTGATAAGTGACACAACCACAGTGATATGTTTGGATGATTATCATTCTCTTGACAGAACAGGAAGGAAGGAAAAGGGAGTCACAGCACTTGACCCAAGAGCCAACGATTTTGATCTCATGTATGAACAAATGAAGGCCATCAAAGAAGGAATTGCTGTTGAGAAACCCATTTACAACCATGTCACTGGTCTCTTGGACCCACCTGAGCTCATCAAACCACCCAAGATCTTGGTCATCGAAGGATTGCACCCAATGTTTGATCCTCGGGTGAGAGAACTATTGGACTTCAGCATCTACTTGGACATCAGCAATGAGGTGAAATTCGCCTGGAAAATTCAGAGAGACATGGCAGAACGTGGGCACAGCCTCGAAAGCATCAAAGCTAGCATCGAAGCAAGAAAACCCGATTTCGACGCTTATATTGATCCTCAGAAGCAATATGCAGATGCAGTGATAGAAGTGTTACCAACACAGTTAATACCAGACGATAATGAAGGGAAGATATTGAGAGTGAGATTGATACAGAAAGAAGGAATTAAGAATTTTAGCCCAGTTTACTTGTTTGATGAAGGCTCCACCATTTCCTGGATTCCTTGTGGAAGGAAGCTCACTTGCTCTTACCCTGGCATCAAATTCTTCTATGGTCCTCAAACTTACTATGGTCATGAGGTATCAGTTGTAGAGATGGATGGCCAATTTGACAGACTAGATGAGTTAATATATGTTGAGAGCCATCTAAGCAACCTGTCAACCAAGTTCTATGGAGAAGTTACACAACAAATGTTGAAGCATGCTGAATTCCCCGGCAGCAACAACGGCACAGGTCTCTTCCAAACCATAATTGGCTTGAAGATCAGAGATCTGTTTGAGCAGATTGTAGCAAGCAGGTCTCAGACACCAGTAAAAGCAGCTAAAGCTTAA 1227 0.4385 MAAFTVYTTQSLNTNSSFTTPSKSHLGFHQKQVLFYRSKTGSRSNSSSRPWVITCSAGDSQTVVIGLAADSGCGKSTFMRRLTSVFGGKAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQMKAIKEGIAVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMFDPRVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGIKNFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFFYGPQTYYGHEVSVVEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHAEFPGSNNGTGLFQTIIGLKIRDLFEQIVASRSQTPVKAAKA 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0894 408 CDD PRK 64 353 - -
Lele51g0894 408 Gene3D - 59 297 IPR027417 -
Lele51g0894 408 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 333 IPR027417 -
Lele51g0894 408 Pfam Phosphoribulokinase / Uridine kinase family 64 262 IPR006083 GO:0005524|GO:0016301
Lele51g0894 408 ProSitePatterns Phosphoribulokinase signature. 213 226 IPR006082 GO:0005524|GO:0005975|GO:0008974
Lele51g0894 408 PRINTS Phosphoribulokinase family signature 178 196 IPR006082 GO:0005524|GO:0005975|GO:0008974
Lele51g0894 408 PRINTS Phosphoribulokinase family signature 231 254 IPR006082 GO:0005524|GO:0005975|GO:0008974
Lele51g0894 408 PRINTS Phosphoribulokinase family signature 69 86 IPR006082 GO:0005524|GO:0005975|GO:0008974
Lele51g0894 408 PRINTS Phosphoribulokinase family signature 213 230 IPR006082 GO:0005524|GO:0005975|GO:0008974
Lele51g0894 408 PANTHER URIDINE KINASE 47 309 - -
Lele51g0894 408 FunFam Phosphoribulokinase 59 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0894 Lele-ChrLele51 5491505 5494660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0894 22 254 PRT Gene Family AT1G55810 26.250 4.02e-17 81.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0877 49 5413205 5416325 Lele51g0894 51 5491505 5494660 hybridization
Lele50g0915 50 5761979 5764729 Lele51g0894 51 5491505 5494660 hybridization