Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0882 ATGTGGACCGGACTCCAGCCACCGCTATTCACGGTGTCCCAGTGGCATGAGCTTGAACACCAAGCTCTAATCTTTAAGTATCTCAAAGCCGGATTATCCGTTCCCCCTGACCTTCTCGCTCCGATTCACAAGAGCCTCCAATTGATGCCGGCTCCTCATTCAGCTCTGGGTTACAGCTCTTTCTTCGGGAAGAAGATAGACCCAGAACCGGGACGGTGCCGGAGAACCGACGGCAAGAAATGGAGGTGCTCGAGAGACGCACACGCAGATTCTAAGTACTGTGAGCGACACATGATTCGCCGTCGCCATCGTTCAAGAAAGCCTGTGGAAACATCACAAGCTACTCATCCTCCTGCTCAGTCATCGGAGGTTAGTGGTGGGTCCAGAAGTGGTGTTGGACACTCATTTCCCAGCCTGCCTCTGCACACAAATGGCACCCGTGAAGGTATAAACCTCGGAGGAAACAACGTATCTCAGCTCCAGATTGAATCTCTTCCCAGTGAGATGAACAAGAAAGAATACAGGTTTGGACTGCAATCTGAAATAGATGAGCATGACTTCCTTCAGAAAGACATAGGAAATGTGAGGTATCTTGGTTTTGACTCTTCCTCAGACAGCATGTGGTCTCAACTGTCTCACATTTCCTCGAATGCTGTCTCTGAATCGAGCGATAGTTCTGTCATGGCTAGCAACTGCTTTCAACTGCAAGGAATGCCGAATACTGAGCCGCCGGTGTCAAACAGTGATGCTGTGACATCCAAGCAACTCGTGTTCAGTGGCCAGTTAGGTTCAACTGGTTGCTTGAAACATGGCTGTCAGTCCTCTCAGGCTCTGATCAATGCTTGGCCATGGAAGGAGTTAGGCTCGCCGCCGGTGATGGAGTACAGACCGAATAAGGATGCTATCTGCTGCCTATTTATTTACTTGAAGGATTTCTGTTGTTCTAATGTTGAAACTTAG 960 0.4927 MWTGLQPPLFTVSQWHELEHQALIFKYLKAGLSVPPDLLAPIHKSLQLMPAPHSALGYSSFFGKKIDPEPGRCRRTDGKKWRCSRDAHADSKYCERHMIRRRHRSRKPVETSQATHPPAQSSEVSGGSRSGVGHSFPSLPLHTNGTREGINLGGNNVSQLQIESLPSEMNKKEYRFGLQSEIDEHDFLQKDIGNVRYLGFDSSSDSMWSQLSHISSNAVSESSDSSVMASNCFQLQGMPNTEPPVSNSDAVTSKQLVFSGQLGSTGCLKHGCQSSQALINAWPWKELGSPPVMEYRPNKDAICCLFIYLKDFCCSNVET 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0882 319 Pfam WRC 68 110 IPR014977 -
Lele51g0882 319 MobiDBLite consensus disorder prediction 94 154 - -
Lele51g0882 319 PANTHER GROWTH-REGULATING FACTOR 5 9 212 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lele51g0882 319 Pfam QLQ 10 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele51g0882 319 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele51g0882 319 MobiDBLite consensus disorder prediction 111 154 - -
Lele51g0882 319 ProSiteProfiles WRC domain profile. 67 111 IPR014977 -
Lele51g0882 319 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0882 Lele-ChrLele51 5418062 5420261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0882 8 113 GRF Transcription Factor Family AT3G13960 56.637 3.11e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lele51g0882 WRC 1.6e-19 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0865 49 5352585 5356751 Lele51g0882 51 5418062 5420261 hybridization
Lele50g0899 50 5657502 5659817 Lele51g0882 51 5418062 5420261 hybridization