Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0880 ATGACTCTGACAGTGACCATCTTCTCAAGCCACCATATCTCTTTTCAGATTCTGAAGAACAACTACTCATCATTAATTTCAATGGCAGCTTCAAGCTCTCTTCTTCTAAAGTTGGAGCAGATTCCAGGTAAAGGAAGAGGTTTAGTTGCAGCTCAGAATCTGAAAGCTGGCCAGATCGTCCTCACTGAATCTCCCATCATTCTCTACTCCACTTTCTCTCTCTTCTCCGAATCATCTTCTTCTTACTGTGACCACTGCTTCAGATCAATCTTACCACCTTCAACCTTATATTCATGCCCTTCTTGTTCTCGCCACCATTTCTGTAGCCAGAAATGTCTCTCTCTTGCTCTCAAATCCTCTCACTCTTCATGGGTCTGTCACGCTCTGTCTTCTCTTCGAAACTCTGGTTCAGATCTTCTTCGTCAATCCCATGAACTTCAAGTTCAAGCTCGTTTCGTTGTCGCTGTTTGTAACCTTTCTCTTCTTTCCCCTTCCAGTACTGAGATCTTGCTTTCTCTTATGGGAACCCCAGATGACGCCATTGTTGAAGCTTCAAGCTTTCTTCACTCTCTCATTTCTTCTCTGTGCCCACCACCACCTCAGGATCATCATCAGCTATCTGCTGAACTCACAGCTCAACTCATGGCTAAAGATAGGCTTAATTCTTTCTGCTTAATGGAACCTTATTCACCAGATGGTCCTCAGAGATCCATCAAGGCGTATGCTATATACCCAAAAGCAACTTTCTTTAACCATGATTGTCTTCCGAATGCATGCAGATTCGATTGCGTAGATGATGGTGCTCCTGGTGGAGATGAACACAACACAGACATTGTGATAAGGATGATTGAGGATGTTGCAGAAGGGAGAGAAGTTTGCATAAGCTATTTCAGAATCAATAGGGATTATTCAACGAGGAAGAAGATCTTGATGGAAGATTATGGATTTATTTGTGGGTGTGAAAGGTGTAAGATTGAAGGCAACTGGGTTGTTGTTAATGATGATGATCAACGAAGCGATTTGCCTCATGGGGGGTTCTTGAAGAAGTATGTGTGTGACAAGAAGAACTGTTCTGGTACGTTGGCTCCTTTGCCTCCAAAGGATGATGGTGGTGGGAAATCTAATGTCTTGGAATGTAATTTCTGTGGCAATATGAAAGTTGAGGTTGATTGA 1173 0.428 MTLTVTIFSSHHISFQILKNNYSSLISMAASSSLLLKLEQIPGKGRGLVAAQNLKAGQIVLTESPIILYSTFSLFSESSSSYCDHCFRSILPPSTLYSCPSCSRHHFCSQKCLSLALKSSHSSWVCHALSSLRNSGSDLLRQSHELQVQARFVVAVCNLSLLSPSSTEILLSLMGTPDDAIVEASSFLHSLISSLCPPPPQDHHQLSAELTAQLMAKDRLNSFCLMEPYSPDGPQRSIKAYAIYPKATFFNHDCLPNACRFDCVDDGAPGGDEHNTDIVIRMIEDVAEGREVCISYFRINRDYSTRKKILMEDYGFICGCERCKIEGNWVVVNDDDQRSDLPHGGFLKKYVCDKKNCSGTLAPLPPKDDGGGKSNVLECNFCGNMKVEVD 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0880 390 Gene3D - 141 222 - -
Lele51g0880 390 Pfam SET domain 45 296 IPR001214 GO:0005515
Lele51g0880 390 ProSiteProfiles SET domain profile. 34 297 IPR001214 GO:0005515
Lele51g0880 390 Gene3D SET domain 47 324 IPR046341 -
Lele51g0880 390 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 334 388 IPR044238 -
Lele51g0880 390 Gene3D - 82 135 - -
Lele51g0880 390 SMART set_7 34 303 IPR001214 GO:0005515
Lele51g0880 390 CDD SET_SMYD 220 323 - -
Lele51g0880 390 SUPERFAMILY SET domain 36 318 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0880 Lele-ChrLele51 5409320 5410623 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele51g0880 SET 1.3e-10 No_clan