Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0877 ATGGAGAGGTACAAGTTAATCAAGGAAGTTGGTGATGGAACATTTGGGAGTGTCTGGAGAGCTATTAATAAGCAAACTGGTGAAGTTGTTGCAATCAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAGTGTGTAAATCTGAGAGAGGTCAAGTCGTTGAGGAAAATGAACCATCCTAATATTGTGAAACTGAAGGAAGTTATTCGAGAATGTGACATTCTATACTTTGTTTTTGAGTTCATGGAATACAACCTGTACCAACTCATGAAAGACAGGTCAAAGCTGTTTTCTGAAGGTCAAGTTAGAAATTGGTGTTTTCAAATTTTCCAAAGTCTTGCTTACATGCACCAGCATGGATATTTTCACCGTGACCTGAAGCCAGAAAACTTGCTGGTCACCAAGGATATTATTAAAGTTGCTGATTTTGGTCTAGCACGAGAGATCAGTTCACAACCACCCTATACTGCATATGTCTCCACACGGTGGTATCGAGCTCCCGAAGTGCTGCTTCAGTCTTATCTCTATGGTCCTGAAGTTGATATGTGGGCAATGGGTGCTATAATGGCTGAACTCTTCACTCTCCGCCCTCTTTTTCCTGGTGCCAGTGAAGCAGACGAGATCTACAAACTATGCAGTGTGATCGGCAGTCCCACAATGGAGTCATGGGCTGATGGGCTTAAACTTGCAAGGGATATCAACTATCGGTTTCCACAGCTTGCTGGGGTTCATCTTTCTGTTCTAATTCCCTCTGCAAGTGCTGATGCTATCGACCTTATGACAGCACTTTGCTCATGGGATCCCAGCAAGAGGCCAACAGCTGCCGAGGCCCTCCAACACCCATTCTTCCATAGTTGCTTCTATATTCCTCCTTCCCTCCGCACCAAAGCAGTAGCCAGAACTCCTCCATCTGTACGGGGATCAGTGTATCGGCACGATGTTGAGAGATGTTCTGGTGCTTTGTCTAATCAGAAGCCAACCACTAATTATTCTTCCACAAAATTACAACCTCCTTTAGCTGCAGGTGTGCAACGCAAATTGGACTGGACAAATGAGAAGGATGGAAATAAGACTGATAAAACCTTGAAGACTGTGAAACAACCAAAATATAGACCTCCCGGAAAGAACAGTCCAATATCTATGAACAAGGGAAGAACAGTACGTGGGGTTTCAGAAACAGCTGACAAGTTTGCTAATATGAACGTTGGAATCCGAAGACAACCTATGGGACAAGCTCGAGTGCCTCCTCCTATGAAAGCCGGAGTCCAATGGGGTTCCGAATCTAAAACCTTGCTGCCGAGGCCTGCTCAGGAGGTTTCTACTGGAAGAACTTTTCCCAGGAAAGTTGCCGGATAA 1356 0.4447 MERYKLIKEVGDGTFGSVWRAINKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRECDILYFVFEFMEYNLYQLMKDRSKLFSEGQVRNWCFQIFQSLAYMHQHGYFHRDLKPENLLVTKDIIKVADFGLAREISSQPPYTAYVSTRWYRAPEVLLQSYLYGPEVDMWAMGAIMAELFTLRPLFPGASEADEIYKLCSVIGSPTMESWADGLKLARDINYRFPQLAGVHLSVLIPSASADAIDLMTALCSWDPSKRPTAAEALQHPFFHSCFYIPPSLRTKAVARTPPSVRGSVYRHDVERCSGALSNQKPTTNYSSTKLQPPLAAGVQRKLDWTNEKDGNKTDKTLKTVKQPKYRPPGKNSPISMNKGRTVRGVSETADKFANMNVGIRRQPMGQARVPPPMKAGVQWGSESKTLLPRPAQEVSTGRTFPRKVAG 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0877 451 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g0877 451 Gene3D Transferase(Phosphotransferase) domain 1 83 289 - -
Lele51g0877 451 CDD STKc_MAK_like 4 283 - -
Lele51g0877 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Lele51g0877 451 FunFam cyclin-dependent kinase F-4-like 1 83 - -
Lele51g0877 451 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 329 - -
Lele51g0877 451 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g0877 451 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Lele51g0877 451 MobiDBLite consensus disorder prediction 409 451 - -
Lele51g0877 451 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Lele51g0877 451 MobiDBLite consensus disorder prediction 366 387 - -
Lele51g0877 451 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g0877 451 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Lele51g0877 451 FunFam serine/threonine-protein kinase MAK isoform X1 84 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0877 Lele-ChrLele51 5388837 5392347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0877 1 290 Core Cell Cycle Gene Families AT3G48750 37.248 2.98e-66 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Lele51g0877 Pkinase 7.9e-73 CL0016