Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0876 ATGGATACTAAACCTAAGTCCGATCAGGTCGTCCTCTTCATCGACCACCTCAACGCTAGCCCTCCTTCTTCCACGGAAACTCATTACAACAACGACGACACCACCACCACCAACAAGCCCAAACTCAATTCCAGAGTCCAAACCCTCAAACGCCTCAGCTTCTCCAAACCCAAATCTCGCATCCTAGAACACAACCACCCACTCTACAACAACAACTTCATCACTGTCCCCGAAGAAGCCGCCCAAGACCCTTCCCGGTATTCTTCCACCGACGACGAATGGAACGACCTCGACGACGATGATGAAGAAGATGACGATGATCAGTTCGAGGAGGACGGCCGACCCAAGTCCAACAAGAAAACCAAACGTCGTCGTCGTAGGAAGATTCAATGGAAACGCGTGGGGGAGTGGGCCTTGTTCCTCATCATATTAACAAGCTTGGTCTCTTGCATCACTATTCCTTCCATCAAAGCAAAACATTTGTGGGGCTTGGAGATTTGGAAATGGTGTTTGTTGGGGATGGTCACGCTCAGTGGACGATTAGTCTCCGGCTGGCTCGTGGCTATCTCCGTCTTCATCTTAGAACGAAACTTCATGCTCAGAGAGAAAGTGTTATATTTCATCTACGGTCTCAGAAAAAGCATCAGAAACTGCATATGGCTTGGCCTCGTTTTATTCTCTTACTGGACCGTCGTCTTCGACAACATCCAGAAGAAAAACCATAAGTTCCTCAACAAGGTGTTTCAGGCCCTTGTCGCCGTCCTCGTCGGAGCCATAATCTGGCTCGTGAAGATCTTTCTGGTGAAACTGCTAGCTTCTTCGTTCCACGTCGCGACCTACTTCGACAGAATGAAAGAGAGCGTGTTCCATCACTACATATTGGACACACTCTCGGGGCTTCCAATGGAGGAGAACGACGAAACGCAGCATCCACTGACGGGGTCGAAATCCATGCCAAGCAACTGGAAGGGAAGCAGCAAGGCAATGAAGGAGGCGAAGAACTTGTACAAGTCGAAGAAGTTTGGGTCGAGGAAGATAGATATGGAGAAGCTGAGAGAACTGAGTATGGAGAGCACGGCGTCTGCGTGGAGCGTGAAGAGGCTTGTCAACTACGTGAGGTGGTCTGGTTTGTCGACGATTTCCCGGACCGTCGATGATTTCGGGAACGCTGAGTCGGAGATATGTAGCGAGTGGGAAGCTAGGAACTGTGCGCAGAGGATTTTCAAGAACGTTGCTAAACCTGGTGCCAAGTATATTGACGAGGAGGATCTCTTGAGATTCTTGAAGAGAGTTGAAGTTCATACTATATTCCCGCTCTTCGAAGGTGCCCTTGAAACTGGGAAGATTTCTAGGTCTTCATTTAGAAACTGGGTGATTCGAGCTTATTATGAAAGGAAGGCTCTGGCACAATCACTGAATGACACGAAAACAGCAGTGCAACAGCTTCACAAACTAGCAAGCTCAATAGTGATAGTGATAATAATTATAGTGCTGCTTTTGGTGATGGAGCTGGCTACTCTCAAGGTCGTACTTTTCTTCATGACACAGATAGTTCTTGTTGGAGTTGCCTTCCAGGGTACCTGCAAAAGTGTGTTGGAGGCCATCATCTTCGTCTTCATCATGCACCCCTTCGACATTGGAGATCGCTGTGTCATTGATGACGTCCACATGATTGTGGAAGAGATGAATATCTTGACGACTGTGTTTCTTCGATACGACAATGAGAAAATCTACTATCCCAACGCAGTTTTGCTCACCAAGCCAATAAGCAATTTCTACAGGAGCCCGGAGATGTGGGATTCTATTGATTTCGTTGTTGATGTTTCCACGCCTATGGAGACCATCATTTCACTCAAGAAAGCAATTCAAACGTACATAGAGAGCAAGCCCAAGTATTGGAATCCAAAGCACTCAGTGATAGCGAAGGAGATAGAGAATGTGGATAAGCTGAAGCTGTGTCTTTGTGTTCAACACACAATCAACCATCAGAACTATGGGGAGAGAAACAATCGGATGACAGAGCTTCTGTTGGAGCTGAAGAAGATCTTTGAGGTGCATGGGGTAAAGTACAATCTTCTCCCTCAGGAGGTCCACCTTACCAAGGTGAACAGTACCCAAAATGGGAGGCCTGTGTTGTAA 2139 0.4731 MDTKPKSDQVVLFIDHLNASPPSSTETHYNNDDTTTTNKPKLNSRVQTLKRLSFSKPKSRILEHNHPLYNNNFITVPEEAAQDPSRYSSTDDEWNDLDDDDEEDDDDQFEEDGRPKSNKKTKRRRRRKIQWKRVGEWALFLIILTSLVSCITIPSIKAKHLWGLEIWKWCLLGMVTLSGRLVSGWLVAISVFILERNFMLREKVLYFIYGLRKSIRNCIWLGLVLFSYWTVVFDNIQKKNHKFLNKVFQALVAVLVGAIIWLVKIFLVKLLASSFHVATYFDRMKESVFHHYILDTLSGLPMEENDETQHPLTGSKSMPSNWKGSSKAMKEAKNLYKSKKFGSRKIDMEKLRELSMESTASAWSVKRLVNYVRWSGLSTISRTVDDFGNAESEICSEWEARNCAQRIFKNVAKPGAKYIDEEDLLRFLKRVEVHTIFPLFEGALETGKISRSSFRNWVIRAYYERKALAQSLNDTKTAVQQLHKLASSIVIVIIIIVLLLVMELATLKVVLFFMTQIVLVGVAFQGTCKSVLEAIIFVFIMHPFDIGDRCVIDDVHMIVEEMNILTTVFLRYDNEKIYYPNAVLLTKPISNFYRSPEMWDSIDFVVDVSTPMETIISLKKAIQTYIESKPKYWNPKHSVIAKEIENVDKLKLCLCVQHTINHQNYGERNNRMTELLLELKKIFEVHGVKYNLLPQEVHLTKVNSTQNGRPVL 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0876 712 MobiDBLite consensus disorder prediction 17 40 - -
Lele51g0876 712 Gene3D - 543 592 IPR023408 -
Lele51g0876 712 MobiDBLite consensus disorder prediction 79 122 - -
Lele51g0876 712 FunFam Predicted mechanosensitive ion channel 543 592 - -
Lele51g0876 712 PIRSF Memb_At2g17000 7 710 IPR016688 -
Lele51g0876 712 MobiDBLite consensus disorder prediction 93 110 - -
Lele51g0876 712 Pfam Mechanosensitive ion channel 487 689 IPR006685 GO:0016020|GO:0055085
Lele51g0876 712 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 24 705 IPR016688 -
Lele51g0876 712 SUPERFAMILY Sm-like ribonucleoproteins 534 592 IPR010920 -
Lele51g0876 712 MobiDBLite consensus disorder prediction 18 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0876 Lele-ChrLele51 5375832 5381961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0876 47 703 Mechanosensitive Ion Channel Family AT5G12080 44.575 0.0 569