Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0869 ATGGAGTTCAGTGAGTATGAGAGCATGACAGTTCGAGAAGTCTGTGCAAATGGGAGTTGCATGGGAACAGCAGAAGTTGAAGTAAAGCTTGATGAAGGAGATATTCAGGAGGCAGAATCTTCATTGCGAGAAGGATTATCACTCAATTTTGAGGAAGCAAGAGCGCTTCTGGGGAAGTTGGAGTATCAGAGAGGGAATGTGGAAGGCGCCCTTCGTGTGTTTGATGGGATTGATCTCCAAGCTGCCATACAGCGATTGCAACATTCCCTTCCTGAAAAACCATTAACCAAGAAGGGGCGAAATCGTACTGAACCACCTCCTTCGGTCTCTCAGCATGCTGCTAGTTTGGTGCTTGAAGCCATCTACTTAAAAGCGCGTTCTCTACAAACTCTAGGGAGATTAACTGAGCACCGAAATTTGAATGCTGCTTTGTGCTATGCGAAGAAATTCTTTGATGAAACAGCCCAGAGAAAATCCTTTGGCTCACTCTTTACTACATCACAGGTTGAAGATGGTAAAGTAAATGAATTTGAGATTTGGCATGGTCTGGCAAATCTATATGCTAGTCTTTCTCATTGGAAGGATGCTGAAATATGTTTGCAAAAGGCCAAAATGTTGAAGCCCTACTCTGCAGCATTGATGCACACCAAAGGTGTAATATTCGAAGGACGTGAAGAAGATCAAGCTGCTCTTGGTGCTTTCTTTAGTGCATTCATGCTTGATCCAAGCTATGTTCCTAGCAAGATCTTGTTGGGTTCTTTGATGCTAAAGCTCGGTTCGAAGGGTTTGCCTGTGGCTAGAAGCTTACTTTCTGAAGCTCTGAGAATAGACCCCACTAACCACAAGGCTTGGTATTATATGGGGATGGTTCATAAAGAGGATGGCCGGATGAGTGATGCTGCTGACTGCTTCCAGGCAGCTTCCATGCTCGAAGAATCGGATCCGATTGAAAGTTTCAGCTCAGTTCTTTGA 972 0.4444 MEFSEYESMTVREVCANGSCMGTAEVEVKLDEGDIQEAESSLREGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLQAAIQRLQHSLPEKPLTKKGRNRTEPPPSVSQHAASLVLEAIYLKARSLQTLGRLTEHRNLNAALCYAKKFFDETAQRKSFGSLFTTSQVEDGKVNEFEIWHGLANLYASLSHWKDAEICLQKAKMLKPYSAALMHTKGVIFEGREEDQAALGAFFSAFMLDPSYVPSKILLGSLMLKLGSKGLPVARSLLSEALRIDPTNHKAWYYMGMVHKEDGRMSDAADCFQAASMLEESDPIESFSSVL 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0869 323 SUPERFAMILY TPR-like 176 311 IPR011990 GO:0005515
Lele51g0869 323 Gene3D Tetratricopeptide repeat domain 24 262 IPR011990 GO:0005515
Lele51g0869 323 ProSiteProfiles TPR repeat profile. 281 314 IPR019734 GO:0005515
Lele51g0869 323 PANTHER PROTEIN NPG1 155 320 IPR043376 -
Lele51g0869 323 MobiDBLite consensus disorder prediction 90 109 - -
Lele51g0869 323 SMART tpr_5 281 314 IPR019734 GO:0005515
Lele51g0869 323 SMART tpr_5 177 210 IPR019734 GO:0005515
Lele51g0869 323 SMART tpr_5 211 244 IPR019734 GO:0005515
Lele51g0869 323 Gene3D - 263 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0869 Lele-ChrLele51 5330421 5333537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0869 155 323 Calmodulin-binding Proteins AT2G43040 65.698 1.39e-74 241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0852 49 5272670 5275772 Lele51g0869 51 5330421 5333537 hybridization
Lele50g0888 50 5582674 5585717 Lele51g0869 51 5330421 5333537 hybridization