Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0864 ATGGCCGACGACGATCCTCTACTCTTCACCACCAACGTCTCCGCCATACTGATCGCCTTGGGCGCCGCCGCCTTCGTCGTCACAATGTACCATCTAATTGCCGTTTGCCTCTGCGGCCCCCAACTTACAGACCCTAACTCTGACCAGCCGCCTCACGCCGCCGGAGTAACACCGCAGCAAGCGTCGCGCATCATTGATGAGAATTCGTTGGAGGAGCTAATTCCAGCACACAAGTACAAGAAGAAGATCGACGACGGCGAGGTGACCTGTGCGGTGTGCTTGGGTGATTTCGAGGAAGGCGAAGAGGTGAGAACATTGCAGGAGTGCTCGCATTCTTTTCATGTGGCTTGTATAGATATGTGGCTCTTCTCTCACCCGAATTGTCCCGTCTGCCGCGCCGATGCCACGCCGCCTCCGGTGGCTCTAAGCACCGCGTCGGAGTCTGTTTCCGGTGAATCGAATTTGAACGCGATTGACCACCGGATAGACATTTTGCAAAATGCTTTGGTTCAGAGTGTCATGTTGCGACGGTGA 534 0.5524 MADDDPLLFTTNVSAILIALGAAAFVVTMYHLIAVCLCGPQLTDPNSDQPPHAAGVTPQQASRIIDENSLEELIPAHKYKKKIDDGEVTCAVCLGDFEEGEEVRTLQECSHSFHVACIDMWLFSHPNCPVCRADATPPPVALSTASESVSGESNLNAIDHRIDILQNALVQSVMLRR 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0864 177 CDD RING-H2_PA-TM-RING 89 132 - -
Lele51g0864 177 Pfam Ring finger domain 89 132 IPR001841 -
Lele51g0864 177 SUPERFAMILY RING/U-box 75 138 - -
Lele51g0864 177 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 10 135 IPR044675 -
Lele51g0864 177 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 53 138 IPR013083 -
Lele51g0864 177 ProSiteProfiles Zinc finger RING-type profile. 90 132 IPR001841 -
Lele51g0864 177 SMART ring_2 90 131 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0864 Lele-ChrLele51 5307988 5308521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0864 9 149 C3H Transcription Factor Family AT3G10910 35.570 7.84e-21 82.8