Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0854 ATGCAAGCCGACTTCACGGTCGGATTTGTCCAAGGACGTCGCTCCGATGCGTCGTTCCGGAGGCTGTCGTTCGTCTCGGATCTGAGCCTGTCGTCGTCGATGCGAATCAACGAGGATCTGGCGCAGTCGTTCGGGTCGGATCTGCACGATTTTCAGCTGAGCGACCTGCGAGCCATAACGCAAAATTTCTCGAGCAATTTTTTGTTGGGAGAAGGAGGGTTTGGGACTGTGCACAAGGGCTACATCGATGATAACTTCCGGCAGGGCTTGAAGGCTCAGCCCGTCGCCGTTAAGCTTCTCGACATTGAAGGCTTGCAAGGACATCGTGAATGGCTTGCAGAAGTAGTATTTCTTGGGCAGCTAAGGCACCCAAACTTGGTGAAGTTGATAGGATATTGTTGTGAGGAAGAAGAACGGCTCCTTGTGTACGAGTTCATGCCAAGAGGAAGCCTGGAGAATCACTTGTTCAGAAGGATATCATCACTGCCTTGGGGAACTAGATTGAAAATTGCAATCGGTGTTGCTAAAGGCCTTTCCTTCTTGCATGGGGCAGAGAATCTAGTCATTTACAGGGGCTTTAAAACTTCCAATGTCTTGCTTGATTCTGATTTCACAGCAAAGTTGTCAGATTTTGGATTAGCAAAAATGGGGCCAGAGGAATCTAAATCTCACGTCACAACCAGAGTCATGGGTACTTATGGATATGCAGCCCCTGAATACATCTCAACGGGTCACTTAACCACAATGGAGAAGACAAGACCAAAGACTGAACAGAGCCTTGTGGATTGGTCAAGACCTTCTTTGAGTAGTTCTAGGAAGTTGAGCAGTTCAAGGACATGGCTATTTCCTGTGGACACTGGCCTGCTTCAGGAAAATCTAGAAATGCAGCTTCTGATAAGATCAAAATTGATATCAGAGTTGGGTACATACAATCAGAATGCAAAATCCAACACCAATCAAACACAACCTATGCCAATAATTTCAGAATTTCTTGAAGAAGAAGAAGAAGAAATGGCGTTAAACAGCAAATTCAGAAAACCCACTTCTTCCTTTCAATACAGCCTCTGCACTACTCTGTTTTTCATTGTTCTCTTCACCATACCTGCTCTGTTCCTCCTCCACACCCCCACCACCAACTCCATATGCACCACGTTCGCCAACCATGTCACGCCCTGGTCTGGTGATCTTCGCTTAGCTGAGTTCTCATGGAACCACCTGCAATTTTTCCAAGACCAGTCCCCACCAATGACTCTGAAAATCGCTGTCTTCTCTCGGAAATGGCCTATTGGCACCACCCCAGGTGGCATGGAGCGCCACGCTTACACTCTTCATACAGCCTTAGCTAGTCGAGGCCATCAAGTTCATGTCTTTACCTCTCCCCGAGATGAAGGCATTTCAATCTCATCAGACAATCATCAAGCAGGCGCACCTTCTTCACCTCACATTCATTGCCATGAGGGTGAACCAGGAAGGTGGAGATACAATAAAGCTTGGGAACAATTTCATGAAGAAAACAAAAGAGAACCCTTTGATGTTGTTCACTCAGAAAGTGTAGCACTTCCTCACTGGCTTGCTCGCAACGTTTCAAATCTTGCAGTTTCATGGCATGGCATAGCCTTGGAGAGCCTGCAATCTAATATATTCCAAGACTTGACTAGGAGGCCCGGTGAGCCAACATCCCCTGCTTTCACAGAAACCTTGCAAGGGGTTGTCCCTAAAGTTCTCAACGAGATAAGATTCTTCCATAATTATGCACATCATGTAGCTATTAGTGATAGCTGTGGTGAGATGTTAAGGGATGTTTATCAGATTCCCAGCAGAAGAGTCCATGTGATTCTAAATGGTGTTGACGTTGGTGACTTCAGGGAAGATGCAGAATTGGGGAAGGAATTCAGAGCTAAACTTGGGATTCCTAGTAATGCAGATTTAGTACTTGGTGTGGCCGGAAGATTGGTGAAGGACAAAGGACATCCTCTGCTTCATGAAGCATATTCCAAGCTAATAACCAAGCACCCCAATGTGTACTTGATTGTTGCTGGTTCAGGACCATGGGAGAATCGGTACAAGGATTTAGGAGGACAAGTTCTTGTTCTAGGATCTATGAGTCCATCCATGTTAAGGGCATTCTATAATGCTATAGACATTTTTGTGAATCCCACACTTAGGCCACAAGGACTTGATCTTACTCTAATGGAAGCAATGATGAGTGGGAAGCCCCTTTTGGCATCAAGATTTCCAAGCATCAAAGGTAGTGTGGTTGTTAATGATGAATTTGGCTTTATGTTCTCTCCAAATGTGGAGTCATTGTTGGAGTCACTTGAAGCTGTGGTGAAGGAAGGTCCAGAGAAGCTAGCAAGAAGGGGAAAGGCATGTCGTGAATATGCAACTTCCATGTTCACGGCTACAAAGATGGCTTTGGCATACGAGAGGCTGTTCCTATGTATAAAAGATGAAGCATTTTGTACCTATCCCTGA 2475 0.4562 MQADFTVGFVQGRRSDASFRRLSFVSDLSLSSSMRINEDLAQSFGSDLHDFQLSDLRAITQNFSSNFLLGEGGFGTVHKGYIDDNFRQGLKAQPVAVKLLDIEGLQGHREWLAEVVFLGQLRHPNLVKLIGYCCEEEERLLVYEFMPRGSLENHLFRRISSLPWGTRLKIAIGVAKGLSFLHGAENLVIYRGFKTSNVLLDSDFTAKLSDFGLAKMGPEESKSHVTTRVMGTYGYAAPEYISTGHLTTMEKTRPKTEQSLVDWSRPSLSSSRKLSSSRTWLFPVDTGLLQENLEMQLLIRSKLISELGTYNQNAKSNTNQTQPMPIISEFLEEEEEEMALNSKFRKPTSSFQYSLCTTLFFIVLFTIPALFLLHTPTTNSICTTFANHVTPWSGDLRLAEFSWNHLQFFQDQSPPMTLKIAVFSRKWPIGTTPGGMERHAYTLHTALASRGHQVHVFTSPRDEGISISSDNHQAGAPSSPHIHCHEGEPGRWRYNKAWEQFHEENKREPFDVVHSESVALPHWLARNVSNLAVSWHGIALESLQSNIFQDLTRRPGEPTSPAFTETLQGVVPKVLNEIRFFHNYAHHVAISDSCGEMLRDVYQIPSRRVHVILNGVDVGDFREDAELGKEFRAKLGIPSNADLVLGVAGRLVKDKGHPLLHEAYSKLITKHPNVYLIVAGSGPWENRYKDLGGQVLVLGSMSPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLASRFPSIKGSVVVNDEFGFMFSPNVESLLESLEAVVKEGPEKLARRGKACREYATSMFTATKMALAYERLFLCIKDEAFCTYP 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0854 824 ProSitePatterns Protein kinases ATP-binding region signature. 69 98 IPR017441 GO:0005524
Lele51g0854 824 FunFam Serine/threonine-protein kinase BIK1 30 145 - -
Lele51g0854 824 Gene3D Glycogen Phosphorylase B; 416 631 - -
Lele51g0854 824 CDD GT4_PimA-like 419 812 - -
Lele51g0854 824 Gene3D Transferase(Phosphotransferase) domain 1 146 255 - -
Lele51g0854 824 Gene3D Phosphorylase Kinase; domain 1 26 145 - -
Lele51g0854 824 ProSiteProfiles Protein kinase domain profile. 63 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g0854 824 Pfam Glycosyltransferase Family 4 434 618 IPR028098 -
Lele51g0854 824 Pfam Glycosyl transferases group 1 632 788 IPR001296 GO:0016757
Lele51g0854 824 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 419 812 - -
Lele51g0854 824 PANTHER GLYCOSYLTRANSFERASE 353 824 - -
Lele51g0854 824 SUPERFAMILY Protein kinase-like (PK-like) 43 248 IPR011009 -
Lele51g0854 824 Pfam Protein tyrosine and serine/threonine kinase 69 248 IPR001245 GO:0004672|GO:0006468
Lele51g0854 824 Gene3D Glycogen Phosphorylase B; 632 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0854 Lele-ChrLele51 5237233 5242636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0854 332 824 Glycosyltransferase AT4G19460 64.671 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele51g0854 Glyco_transf_4 2e-20 CL0113