Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele51g0850 | ATGGGATCCAGTGGTAGTAAAGCCGTTGCTTCTTGCAATTCGTCGTCGACGTCGTCGTCTTCGGGCAGTTTTCGTAAAGTTCGATCTAGAGGGCATAGAGGTTTTCAGTCTTATTGTTTAGGAACACCTTCTGGATCTCATGACAATGACAATGACAATGACGACCAGGTGTGTGATCAGAGTAAAGAAAACGATAGTAATGTTACATACTCCAATGATGAAGAAACAGATGCAGATGAGATGATATCGGAGTCTTTCAGAAAGATTAAATCTGATAAAATGCCATGTATACCTCCTAATGTCCACCTCGATGAGTGGAGTCAAACAAGCATTTCCAATACTGCATCTAGAAATGGTAGCAGTTCTGATCGTCCAGCTTCAACTCAGTCTTTGAACCCTTCAAGTCGATTCCTTTCTCGGTTTAGCCTTAGTCCCGGTAACGTAAGCTTCAGACTAAGCAGAACCACAAGTTTGGGGTCATCACGGCCTTGCCCTGTTTCTCCTGCAGGCCTCCCAATATTTAACAATGAAGATGACCTTAATCCACAGCCTGGGGCTGCCGGCAGCTTCGCTAATCAACATGAAGCTCTACAATGCAGTGACTTGCTTCCTTCATCACATTGCTATGAAGACGCTTCTATTAATTTAAGGTCTAGTGTCCCTTCATCAGATTCCTATGGCAACTTGCAAAACAATTCAACAAATTCTTCTATGCAGACTATGATTAGAGATGAAAATGGTGCGAGACAAGGGTTAAATATTAACTTATTTTCTTCAAGAATTCACGCCAGAACAGAAAACGTTGAGATGAGACCTAATGATCGCCGAAATGGAGCTCGAGAACATGTTGAACGGAATGTTCGCTTTAGTCGTACTTTGAGTGTTGGAAGGCTCCGTGATAGGGTTCTTCGCCGATCAACAATATCAGAGTTCACCTTTTGCCCACTGCAACAAGAAAGGGATGCAACAGATGCTAGTCAAGCTATTGGAAGACAAGCAGGGGAGAGAGAGTCAAGAGTGCTACCATCTGACGGTGACTCTACAAGTTCCCCTTCTACATCTGGATATCCTCCATCCAATATGTCTAGCTCCTTGTTTGGCATCCAAGACTATGAGGTCGAGTCTTCACGATCAAGAGAAGCTAGGTACCGTGATCTACTGGAGAACAGATCCAATTTCCTAGAACGGAGAAGAAGAATACGGTCCCAGGTCCGTGCTCTTCAACGATTGGGCAGCCGATTTGAAAACCTGTCTGGGCATGATAGGTCATGTATTTTATCTGGCCAACATAGAAATGGTCGTTGTACATGCCGAATTAGTAATCGTGATGCCCATTCAAATGATGATACTGGGGCTAGAGCTAGCATATCAAGAATTGTTATGCTTGCCGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCAGTGGTTTTATCTTCCCGCCCTTCTGTTTCTTCTATCGGATCTGTTCCTGCACCTTATGAAGTTGTAGAATCCTTGCCTGTCAAACCATACACAAAGTTGCATAAACATCAAGAGGACGCCGCTCAATGCTATATATGCCTTGTGGAGTATGAGGATGGAGACAGCATGCGAGTACTACCTTGTCATCATGAATTTCATTTAACATGCATAGACAAGTGGCTAAAGGAGATTCACAGGGTATGCCCACTATGCCGTGGGGACATCTGCAATGCTGATTCGATACCAACCGAGAACTGA | 1728 | 0.4387 | MGSSGSKAVASCNSSSTSSSSGSFRKVRSRGHRGFQSYCLGTPSGSHDNDNDNDDQVCDQSKENDSNVTYSNDEETDADEMISESFRKIKSDKMPCIPPNVHLDEWSQTSISNTASRNGSSSDRPASTQSLNPSSRFLSRFSLSPGNVSFRLSRTTSLGSSRPCPVSPAGLPIFNNEDDLNPQPGAAGSFANQHEALQCSDLLPSSHCYEDASINLRSSVPSSDSYGNLQNNSTNSSMQTMIRDENGARQGLNINLFSSRIHARTENVEMRPNDRRNGAREHVERNVRFSRTLSVGRLRDRVLRRSTISEFTFCPLQQERDATDASQAIGRQAGERESRVLPSDGDSTSSPSTSGYPPSNMSSSLFGIQDYEVESSRSREARYRDLLENRSNFLERRRRIRSQVRALQRLGSRFENLSGHDRSCILSGQHRNGRCTCRISNRDAHSNDDTGARASISRIVMLAEALFEVLDEIHQQSVVLSSRPSVSSIGSVPAPYEVVESLPVKPYTKLHKHQEDAAQCYICLVEYEDGDSMRVLPCHHEFHLTCIDKWLKEIHRVCPLCRGDICNADSIPTEN | 575 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele51g0850 | 575 | MobiDBLite | consensus disorder prediction | 321 | 364 | - | - | |
Lele51g0850 | 575 | CDD | mRING-H2-C3H2C2D_ZSWM2 | 519 | 562 | - | - | |
Lele51g0850 | 575 | SMART | ring_2 | 520 | 561 | IPR001841 | - | |
Lele51g0850 | 575 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 1 | 574 | - | - | |
Lele51g0850 | 575 | MobiDBLite | consensus disorder prediction | 343 | 364 | - | - | |
Lele51g0850 | 575 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Lele51g0850 | 575 | ProSiteProfiles | Zinc finger RING-type profile. | 520 | 562 | IPR001841 | - | |
Lele51g0850 | 575 | MobiDBLite | consensus disorder prediction | 1 | 79 | - | - | |
Lele51g0850 | 575 | Pfam | Ring finger domain | 519 | 562 | IPR001841 | - | |
Lele51g0850 | 575 | MobiDBLite | consensus disorder prediction | 111 | 133 | - | - | |
Lele51g0850 | 575 | FunFam | Putative RING zinc finger domain superfamily protein | 489 | 567 | - | - | |
Lele51g0850 | 575 | SUPERFAMILY | RING/U-box | 498 | 567 | - | - | |
Lele51g0850 | 575 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 484 | 567 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele51g0850 | Lele-ChrLele51 | 5206050 | 5209828 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele51g0850 | 47 | 569 | C3H Transcription Factor Family | AT5G45290 | 45.656 | 1.20e-112 | 345 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele51g0850 | 51 | 5206050 | 5209828 | Lele51g0850 | 51 | 5206050 | 5209828 | ECH | |
Lele49g0829 | 49 | 5134596 | 5138286 | Lele51g0850 | 51 | 5206050 | 5209828 | hybridization | |
Lele50g0862 | 50 | 5424363 | 5428308 | Lele51g0850 | 51 | 5206050 | 5209828 | hybridization |