Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0840 ATGGATAGGAGAAGGAGAACTGTGATAGACAATGGTGATGCTGGTGGGCAGGGGGAGGACTTGGTTCTAGCGACTTTGATTGGAAATGGAGAAGATCTTGGTCCTCTTGTTAGGCACGCCTTCGAAATGGGGCGACCAGAGGGTCTTCTTCACCAATTGAAACATTTAGTGAAGAAGAAGGAGGTTGAAATAGAGGAGATGTGTAAGACACACTATGAGGATTTCATTGTTGCGGTGGATGAGCTTCGAGGCATGCTGGTTGATGCTGAAGAGCTCAAGAGCGAGCTTCAGAGTGATAAGTTCAAGTTACAGCAGGTTGGAAGTAGCATTCTTGTGAACCTTGAGGAGCTTTTTGAATCTTTTTCCATCAAAAAGAATGTTAATCAAGCTATAAAGATGTCAAAGTATTGTATTCAGGTGTTGGACCTTTGCGTTAAGTGCAACAATCACATATCTAATGGTCAGTTTTATCCTGCATTGAAGACTGTGGATTTGCTTGGGAAGAATTACTTGCAGAATATTCCAGCAAAGGCAGTGAAGAAAGTGGTGGAGATGAGAATTCCTGTGATAAAATCTCACATTGAGAAGAAATTCCCGCTCCTTCCTTCCTTCATCGCTAACTTCGCTCGAATTTCTATTTTCTCAAACAACGCTCATCTTATTCACTCCATGGCGAGTGATTCTGGCACAAAACCTGCCCCTGCTTCTTCGTCTTCTTCAACTGCAGGGGAATCTTACATTGGGAGCTTTATCAGTCTGATTTCCAGGTGCGAGATTCGTTACGAAGGCGTTTTGTTTCACCTCGACGTCGGGGATTCCACCATTGGCTTGAAGAGCGTCAGATCTTTTGGGACCGAGGGGAGAAGAAAAGATGGTCCACAAGTTCCTCCAAGTGACAAGGTTTATGAATACATTATTTTTCGAGGGAGTGACATTAAGGATTTGCAGGTCAAGGCCCTCTCTACATCTATCAAGGAGGAGCAGGTATTCAGCGATCCAGCTATTATCCAGTCACAATATTCTGAAGTGCCTTCAAGGTCTCCTATGGCTTCAGTGGGTGGGAGAAGTTTGAAAGAATCAATTCAAAATTCTGAAGTGCCTTTAAGTTCTCCTATGGCTTCAGTGGGTGGGAGAAGTTTGACAGAATCAATTCAATGGCAAGATACTCCTGCTATGACCGCTAGAGACATTCCTCTTCCTGTTGGGTTTCCTTCTCATCAATCTGCAACGTCGATGGGTCCATCAGATCAATCTTCTGTTACTCATGTTTCTGGTGCTCCTTCTTTCTCTACAACAGTGTATTGGCCAGAATATAGTGGGATATCAGGAAGTAGCTCTCATTCTCTGCTGCAGTGTGGTCCTTTTCAGTCCCCTTCAGGAGTGGCACCTTTAAATTCACAGAGCTGGGGCCAAACTCCAGAAAGTCAGTTTCCTTCTTCAAAAGTGTGCTGGACTACTTTACCGGAGCATGGTGAACCTGTCTCATCTGTTACTGTTTCGTCTCTTGTAAATCCGTCTTATGAACCTTCATCTTCCTCTTTACAAACTTCTGATTCTCTAGATGCTCCACCTCTTTTGTCTTCTAAGACACCGTTTCCCTATCATTCTTCTGTGTCTGAATCAAACATGCCTTTATTTTCTTCACCGTTTCAAGGCATAAATTCTGTCAAAGATCAATTTCCTGGAAAAACTTCTCCTTACACGGGATTATTGTTTCCTGGACAATCTGCCCTTCATTCTGTTTCTTCATCAGTTGATTCTACGTCAGGCTCCTTGCTTAGACCTCCATCTTTTTTAACTCCAGATCAGTCTGCTCATTCTAGACAGAATTTTGTTTCTTTAGTACAGAACCAGATCTCTGATCAGAATCATATGGTTTCTCTGGCACCAACACCCTCTAGCTCCTCTTTTTTAGTACAGTCTCCAGAATTTCAAGCACCATTGTGGCCTTCACCACCATTTCCGACTTCAGTGCACAAGCCTCAGTACTTAGCTTCACAGTTCAGTGAAGAGTTTGATTTTGAGGACATGAACGAAAAGTTCAAAAAGGATGAAGTATGGGGTTCTCTTGGGAGGGCATCGAAGACAATTGAAGGACTGGAGGAGAATGCTCCAACTGACAGCTTGGGTGATAGAGAGTATCATCGGTTTCAACCTAACCTAAACCCTAAGCCTGCATATAAGAAAGACGACTTTTTTGACACAATTTCATGTAACTCTCTCTCTCGTGGATCAAGGAATGGACAGAATCGCCTATCTGAGAGAATGAGGCTGGATTCTGAGACTTTTGGCAATTTTCACCGGAGTCCTACTATGGGTTATGGTGGTGGAAGCGGTGGATATTACCGGAGTTCATACAATATGGGAAGGGGTTATAGCTATTATGGTGGAAGAGGGCATGGCAGGAACATTACTTTCCATTAG 2424 0.434 MDRRRRTVIDNGDAGGQGEDLVLATLIGNGEDLGPLVRHAFEMGRPEGLLHQLKHLVKKKEVEIEEMCKTHYEDFIVAVDELRGMLVDAEELKSELQSDKFKLQQVGSSILVNLEELFESFSIKKNVNQAIKMSKYCIQVLDLCVKCNNHISNGQFYPALKTVDLLGKNYLQNIPAKAVKKVVEMRIPVIKSHIEKKFPLLPSFIANFARISIFSNNAHLIHSMASDSGTKPAPASSSSSTAGESYIGSFISLISRCEIRYEGVLFHLDVGDSTIGLKSVRSFGTEGRRKDGPQVPPSDKVYEYIIFRGSDIKDLQVKALSTSIKEEQVFSDPAIIQSQYSEVPSRSPMASVGGRSLKESIQNSEVPLSSPMASVGGRSLTESIQWQDTPAMTARDIPLPVGFPSHQSATSMGPSDQSSVTHVSGAPSFSTTVYWPEYSGISGSSSHSLLQCGPFQSPSGVAPLNSQSWGQTPESQFPSSKVCWTTLPEHGEPVSSVTVSSLVNPSYEPSSSSLQTSDSLDAPPLLSSKTPFPYHSSVSESNMPLFSSPFQGINSVKDQFPGKTSPYTGLLFPGQSALHSVSSSVDSTSGSLLRPPSFLTPDQSAHSRQNFVSLVQNQISDQNHMVSLAPTPSSSSFLVQSPEFQAPLWPSPPFPTSVHKPQYLASQFSEEFDFEDMNEKFKKDEVWGSLGRASKTIEGLEENAPTDSLGDREYHRFQPNLNPKPAYKKDDFFDTISCNSLSRGSRNGQNRLSERMRLDSETFGNFHRSPTMGYGGGSGGYYRSSYNMGRGYSYYGGRGHGRNITFH 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0840 807 MobiDBLite consensus disorder prediction 402 423 - -
Lele51g0840 807 Gene3D - 236 322 - -
Lele51g0840 807 ProSiteProfiles TFG box profile. 747 767 IPR025768 -
Lele51g0840 807 ProSiteProfiles DFDF domain profile. 660 696 IPR025762 -
Lele51g0840 807 CDD LSm14_N 243 317 IPR025609 -
Lele51g0840 807 PANTHER SCD6 PROTEIN-RELATED 240 802 - -
Lele51g0840 807 SUPERFAMILY Sm-like ribonucleoproteins 245 318 IPR010920 -
Lele51g0840 807 Coils Coil 79 99 - -
Lele51g0840 807 Pfam Scd6-like Sm domain 246 318 IPR025609 -
Lele51g0840 807 MobiDBLite consensus disorder prediction 404 423 - -
Lele51g0840 807 Pfam FDF domain 667 765 IPR019050 -
Lele51g0840 807 SMART FDF_2 666 767 IPR019050 -
Lele51g0840 807 ProSiteProfiles FFD box profile. 725 740 IPR025761 -
Lele51g0840 807 SMART LSM14_2 240 340 IPR025609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0840 Lele-ChrLele51 5115098 5126458 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0840 51 5115098 5126458 Lele51g0840 51 5115098 5126458 ECH
Lele49g0817 49 5013989 5018169 Lele51g0840 51 5115098 5126458 hybridization
Lele50g0854 50 5336847 5343579 Lele51g0840 51 5115098 5126458 hybridization