Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0827 ATGAAAGGGCGCTCGCACCGCCTGCAGAGTTCGGACCCACCCGACGACTGGATTGATGGTTCTTGGACGGTGGATTGCGTATGTGGTGTGAATTTTGACGATGGGGAGGAGATGGTGAATTGTGACGAGTGCGGTGTGTGGGTGCACACGCGTTGCTCGCGATATGTTAAAGGAGATGATATGTTCGTATGCGATAAGTGTAAGAGCAAGATTAATCGATCTGATACGGAGGAAACGGAGGTGGCTCAGTTGTTAGCTGAGCTCCCTACGAAGACCTTGAGATTGGAGAATTCATTTGCACCCATCGGAGCTCCTCGGCGTCCTTTCAAGCTTTGGACTGACATGCCTATGGAGGAGAGGGTGCACGTTCAAGGAATTCCTGGGGGCGATCCTTCCCTTTTTGGTGGGATATCCTCTATTTTTAATCGGCAGCTATGGAAATGCACCGGGTATGTTCCCAAACAGTTTAATTTTCAGTATAGGGAATTTCCCTGCTGGGATGAGAAATCCACTAGGGAGGAGGATAATGAGAACCCTATCAATAAGGGGGCTGGAGTTCTATTTTCCTTGTCAAAAGAGAGTATATCGGCCACCCCTATTGCAACTTTAGTTGACATGAGAGCTAGGGAGGGAGAAGATGGTTCTGACCTGAAGAAGTCTTTGAAAGAGATGAAAAAGAGTGATAGTGAAGATGCGGAGGCCATAAGGCGTGCCCAGAATGGCATGAAGAAGGAGAGAAGTTTGCTTCGGTCTGTTGTGCATGCAGGTAAGCAGAAAAAAGAAGAGTTGGGAACATCCAAAGATCGCATTGAGAAGAAGAGGATTAAAACTTCGGACAAAGAGGTAGATCCCAAGAGGAGAACTTCACATACTTCGAAAACAGCTTCAGAATTAGGACCTTGAGGTCTGAAGAATTTCAAGACTGATACCTGGAGCGTAAAGAATAAAACTTTGAAAGGCATTGCGGTTCAGGAACACGTTTCAAATAATTACTCTGTTGTGGATACCATTATGGAGGAGCCAAATATCAACTCGGCAACTACTGAGGATTCTTCAGAAGCCTTATATCCTGACGTGACAAGACATAGTTTTTCAGTTGGACCAGAAATAGCAGAAGAGAAAACTGAAAAAGCTCCTTCTGTTTCTGAAATTTCTTCCAAGACTGATGATAACATTTCACCATATTTAAAGAATAATTCTGCTGGAAATGCTTCAATTAAAGAACAGGAGGGAGATGGCCTGGCAGTTGATAATGCAGATGACAGTATAGTAGTAACAAGCTCAAGAAGTCCTGCAGAAGAAGATCTTTGTGGTCCTGCACCAGAACCCAGGGATAACAAGGATTCCCAAGATTTTGGCCATGAAACGTATCCTAGCTCTGGACAGAGCAATCTTAAGGTGAAGAGAGAAGGGGATAATGATAATTTTGGGAAGCATTTGATTTCTCATGCTTCTAGCATGAGTGATCTGAAAAGTGATGAGAAACAGCCTAAACGCAAATATGACCATGTTAATGATAGTGTGGTGACCAATTCATCCTACGAAAATAAGGTGGAAGACAGTGACAGAAAATCAGAAGTAATCATTGATTGCCATACCAATAATTCTGAGGAATTATCATGTCATTTTGGTCCTGTAAAACAAGAAATGGCAGGATCTGAAGGTCCCATGGAAACCCAGAAGGGTTTTTCAGAAATAGAAGATGGTTCTGGCTATGCTGAAGATTCATCAAAATCTGAAACTACATTGTGTCCTCATAAAATGTTATCATGTCTTGGGAAGTCATCCTTAAGTTCCTCAACTATGAATTCCAAAATTCCTGCTAGTGACCAAAAATCTGAACAGACTGAAATTCCTAATCCTCCTGTCAAGCATGGAGTAACGGCAGATTGCAACGTGTACAATAAGAAAGAATGTAATCAAAATGATATTGTGAGGGATGAAGTTCCTAGGAAGTCTCTAAAAGAACGCCTGAAATCAACTTCAAATTCTAATTTGAAAGCAATGCATTCAAGCAAAAGTGCACAAAATGCGGTTTTAAGGCAAGTCAGTGCAGATTCAAAAGATTTTGTAAACAGTTCATCTTCTAAAGCATCTTTGGTTCATCCAACTGGAACTAATTTAGGCTTGAGCGAGTCTAATGAATCATTACTGCACCAAAAGTCTTTACAAGCCCCAAATAAGATTTCGTCTTCGGTACCACAGAGAGGTGAAAAGATTAATCAGACGAACTCCCAACCTTCCTCTAAGGTGATACCTTCGCCAACATCTAATTCTTCTGCAATGCTAAGTGATGAGGAGCTTGCACTACTATTGCATCAAGAACTAAATAGCTCTCCCCGAGTTCCTCGGGTACCTCGAGCACGTCATGTGGGTAGCTTGCCACAACTAACTTCTCCTAGTGGTGCAAGCATGCTATCAAAGCGCACATCTTCTGCTGGAGGAAAGGATTATTGTTTGTTTTCTCGGCGAAAATACAAGGATGCATCTAGAGATGGGCATTGCAGTTCCCGTGAGCTTGAAGATGAAGCTAAAAGGATAGAGAATGCATCATCTTCCCTTGATCTGAAGAAAAAAGATATGGAATGTGTGGAAGATGCTTCTGTAATGGAAGAAGGCCACATATCTATGACAACCATCAATTCTACAACCTCTGCTGCCACTGCAAATAGTGGTTCAGCCTCCCCTCCTGAGGATCAAAACTTGCCGTTCATACGCAACTCACCTAAAAATATATCTGACGATGATAATGGAACTGCTGGAAGGCCAGCCCATCGCACTTTGCCTGGCTTGATTAATGAGATTATGAGCAAAGGTCGTCGGATAACATACGAGGAACTCTGTAATGCTGTGCTGCCGCACTGGAATAACTTGAGGAAGCATAATGGAGACCGCTATGCTTACACAAGTCACTCTCAAGCTGTTCTTGATTGTTTGAGGAACCGGCATGAATGGGCAAGGATGGCAGAACAGGTCAAGTGGGAAGTGAAACTTCTGCTAGTTCAGACGCGGAAGGTAGCGCCTAATTGCAGGGTGGCTGAATATCTTGACAGGATCGTCTCTGCCATGCTTGTTCGGCTTCTTTTTGAGCAGTTCAGCTTCTTTGGATTCATGGCTCATGAAAGACAGAGGAGGCGGCAAGCTGTTTAG 3150 0.4324 MKGRSHRLQSSDPPDDWIDGSWTVDCVCGVNFDDGEEMVNCDECGVWVHTRCSRYVKGDDMFVCDKCKSKINRSDTEETEVAQLLAELPTKTLRLENSFAPIGAPRRPFKLWTDMPMEERVHVQGIPGGDPSLFGGISSIFNRQLWKCTGYVPKQFNFQYREFPCWDEKSTREEDNENPINKGAGVLFSLSKESISATPIATLVDMRAREGEDGSDLKKSLKEMKKSDSEDAEAIRRAQNGMKKERSLLRSVVHAGKQKKEELGTSKDRIEKKRIKTSDKEVDPKRRTSHTSKTASELGPXGLKNFKTDTWSVKNKTLKGIAVQEHVSNNYSVVDTIMEEPNINSATTEDSSEALYPDVTRHSFSVGPEIAEEKTEKAPSVSEISSKTDDNISPYLKNNSAGNASIKEQEGDGLAVDNADDSIVVTSSRSPAEEDLCGPAPEPRDNKDSQDFGHETYPSSGQSNLKVKREGDNDNFGKHLISHASSMSDLKSDEKQPKRKYDHVNDSVVTNSSYENKVEDSDRKSEVIIDCHTNNSEELSCHFGPVKQEMAGSEGPMETQKGFSEIEDGSGYAEDSSKSETTLCPHKMLSCLGKSSLSSSTMNSKIPASDQKSEQTEIPNPPVKHGVTADCNVYNKKECNQNDIVRDEVPRKSLKERLKSTSNSNLKAMHSSKSAQNAVLRQVSADSKDFVNSSSSKASLVHPTGTNLGLSESNESLLHQKSLQAPNKISSSVPQRGEKINQTNSQPSSKVIPSPTSNSSAMLSDEELALLLHQELNSSPRVPRVPRARHVGSLPQLTSPSGASMLSKRTSSAGGKDYCLFSRRKYKDASRDGHCSSRELEDEAKRIENASSSLDLKKKDMECVEDASVMEEGHISMTTINSTTSAATANSGSASPPEDQNLPFIRNSPKNISDDDNGTAGRPAHRTLPGLINEIMSKGRRITYEELCNAVLPHWNNLRKHNGDRYAYTSHSQAVLDCLRNRHEWARMAEQVKWEVKLLLVQTRKVAPNCRVAEYLDRIVSAMLVRLLFEQFSFFGFMAHERQRRRQAV 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0827 1049 MobiDBLite consensus disorder prediction 659 675 - -
Lele51g0827 1049 MobiDBLite consensus disorder prediction 644 658 - -
Lele51g0827 1049 MobiDBLite consensus disorder prediction 794 809 - -
Lele51g0827 1049 MobiDBLite consensus disorder prediction 438 452 - -
Lele51g0827 1049 MobiDBLite consensus disorder prediction 644 675 - -
Lele51g0827 1049 MobiDBLite consensus disorder prediction 882 926 - -
Lele51g0827 1049 MobiDBLite consensus disorder prediction 364 504 - -
Lele51g0827 1049 MobiDBLite consensus disorder prediction 595 629 - -
Lele51g0827 1049 MobiDBLite consensus disorder prediction 214 234 - -
Lele51g0827 1049 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 75 IPR013083 -
Lele51g0827 1049 MobiDBLite consensus disorder prediction 253 292 - -
Lele51g0827 1049 MobiDBLite consensus disorder prediction 547 579 - -
Lele51g0827 1049 SMART PHD_3 25 68 IPR001965 -
Lele51g0827 1049 SUPERFAMILY FYVE/PHD zinc finger 14 72 IPR011011 -
Lele51g0827 1049 PANTHER UNCHARACTERIZED 1 1002 - -
Lele51g0827 1049 MobiDBLite consensus disorder prediction 381 406 - -
Lele51g0827 1049 MobiDBLite consensus disorder prediction 882 915 - -
Lele51g0827 1049 MobiDBLite consensus disorder prediction 488 504 - -
Lele51g0827 1049 MobiDBLite consensus disorder prediction 780 809 - -
Lele51g0827 1049 MobiDBLite consensus disorder prediction 595 618 - -
Lele51g0827 1049 Coils Coil 837 857 - -
Lele51g0827 1049 ProSitePatterns Zinc finger PHD-type signature. 26 67 IPR019786 -
Lele51g0827 1049 MobiDBLite consensus disorder prediction 695 763 - -
Lele51g0827 1049 MobiDBLite consensus disorder prediction 253 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0827 Lele-ChrLele51 4993265 4998238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0827 24 67 PHD Transcription Factor Family AT5G22260 42.553 6.03e-06 48.5