Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0806 ATGGATTCCGGCGTTGGTTTTTCTGTTGGCAAGTTTGAGAACGATGATGCTGATGTTGTGGAGAAAGATCCTACTGGTCGTTACATCCGGTATGATGATATGTTGGGGAGAGGAGCATTCAAGACTGTATATAAGGCATTTGATGAAGTTGATGGGATAGAAGTTGCCTGGAACCAAGTGAATATTGAGGACGTTTTGCAGTCTCCACAACAATTGGAAAGGTTATATTCTGAGGTACATCTCCTGAAGTCATTGAAACATGAAAACATCATCAAGTTGTATAATTCTTGGGTGGACGATACAAACAAGACCATTAACATGATAACTGAGTTATTCATCTCTGGGAGTTTGAGACGATATCGAAGAGTGCATAAGAATGTTGAATTGAAGGCCATCAAGAACTGGGCAAGGCAAATTCTTCAAGGTCTATGCTATCTGCATACCCACAATCCTCCAATTATCCATAGAGATTTGAAATGCGATAATATTTTTATTAATGGTAATACTGGAGAAGTTAAGATTGGAGATCTTGGACTGGCAACTGTCCTACAGCAACCCACTGCACGGAGTGTCATTGGGACGCCGGAATTCATGGCTCCTGAGCTTTATGAAGAAGAGTATAATGAACTTGTTGACATATATTCTTTTGGCATGTGCATGTTAGAAATGATCACCTGTGAGTACCCATATAGCGAATGCAAAAATCATGCACAGATATATAAGAAAGTTACCTCTGGAATAAAGCCTGCTGCTCTTGGTAAAGTGAATGATCCGCAAGTGAAGCAATTCATAGAGAAATGTTTAGTTCCAGCGTCTGAGAGATTGCCTGCATCTGAGCTATTGAAGGATCCATTTCTTGCTACTGACAACATAAAGGAGATCAACCATGCACTGCAGTTGCCCAATCGCATGACTGAATTGGTGACACCACCAACAATTGAGCCACGTCCCATGGAGATAGACCAAACCGTCAAGGATGTTTTACCTGGCTCCCGTCTGGAATTTACTGAAGAAACTCCTCAAATATTAACTCTAGATTTCCTTAGGAAGGATAAGGGTAATAAATTCAGATTACAAGGGGAGAAAAATGCTTCAGACAGAACAATTTCACTTAACCTGCGCATTGTTGAAGCAAATGGTCTTGCGAGGAATATCCACTTTCCATTCTATATTGATTCTGATACAGCCATTTCAATTGCTGAGGAGATGGTTGAAAATCTGGATCTTGCCGCTGAGGACGTGAGCATTATTGCTGAACTAATACGCACCATGACTGTCAGGCTGTCGCGTCAACAATCATCATCTGGAGAAGATTGTTTGGGTGGCCATTCTCATGTAGTTCTAAATGGGGGATCATCATTAAGGTGCCATAGTGTTGAGGATCTTGTTAACTCACAGGTTCTTGATGAAGATCAGGAGAAACGGGAATCAATTATGTCAGGCATTTCAGCGGAGGATGAGATTACGGTCGTCTCAGATGCTAAAAACTTACAAGGTGATTATACTCTCTTTGATGGATTCTGTGAGGGTCCCATTGCCAAAAGGTCCAATTCAGATGTCAGGTTGTATGATCAAGATGAACGCAATAGGGAAGTTAATGGCGGTGGATGTGTTAACATCAATGGGTCTGATAGGAACTCAGGGAACATCGTTTCAGAGAACTCAACTGTCTCATTTATAGATTCATGTGGCGATGAGCCCAAGAATTTTTACATGTCAAGCATCAATTCTCTTTCTCTCGCAGACAAGGATCAATGTGACGAGCTGCAACTGGAGCTTGATGCAATAAATACACAGTTCCTCCAATGCTTTCTTGAACTTGCCAAGACGAGGGAGGATGCAATAGAAAACGCAAAAAGGAGACGGATTACAAGGAAGAAAATACCAGTAGTGTGA 1896 0.414 MDSGVGFSVGKFENDDADVVEKDPTGRYIRYDDMLGRGAFKTVYKAFDEVDGIEVAWNQVNIEDVLQSPQQLERLYSEVHLLKSLKHENIIKLYNSWVDDTNKTINMITELFISGSLRRYRRVHKNVELKAIKNWARQILQGLCYLHTHNPPIIHRDLKCDNIFINGNTGEVKIGDLGLATVLQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCMLEMITCEYPYSECKNHAQIYKKVTSGIKPAALGKVNDPQVKQFIEKCLVPASERLPASELLKDPFLATDNIKEINHALQLPNRMTELVTPPTIEPRPMEIDQTVKDVLPGSRLEFTEETPQILTLDFLRKDKGNKFRLQGEKNASDRTISLNLRIVEANGLARNIHFPFYIDSDTAISIAEEMVENLDLAAEDVSIIAELIRTMTVRLSRQQSSSGEDCLGGHSHVVLNGGSSLRCHSVEDLVNSQVLDEDQEKRESIMSGISAEDEITVVSDAKNLQGDYTLFDGFCEGPIAKRSNSDVRLYDQDERNREVNGGGCVNINGSDRNSGNIVSENSTVSFIDSCGDEPKNFYMSSINSLSLADKDQCDELQLELDAINTQFLQCFLELAKTREDAIENAKRRRITRKKIPVV 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0806 631 Gene3D Phosphorylase Kinase; domain 1 13 110 - -
Lele51g0806 631 Gene3D Transferase(Phosphotransferase) domain 1 113 294 - -
Lele51g0806 631 FunFam Probable serine/threonine-protein kinase WNK1 14 110 - -
Lele51g0806 631 Pfam Protein kinase domain 33 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g0806 631 SMART serkin_6 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g0806 631 ProSiteProfiles Protein kinase domain profile. 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g0806 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Lele51g0806 631 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 15 472 - -
Lele51g0806 631 FunFam probable serine/threonine-protein kinase WNK9 112 291 - -
Lele51g0806 631 Gene3D - 367 442 - -
Lele51g0806 631 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 382 423 IPR024678 GO:0004674|GO:0005524
Lele51g0806 631 CDD STKc_WNK 27 286 - -
Lele51g0806 631 SUPERFAMILY Protein kinase-like (PK-like) 24 305 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0806 Lele-ChrLele51 4867604 4870231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0806 1 630 MAP Kinase Kinase Kinase AT5G41990 52.923 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele51g0806 Pkinase 3.9e-52 CL0016