Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0799 ATGTTGCAATGTAAAGGATTGGTTTGGATTCCTTATATATTGTTTTCTTCCTCCTTTGCTTTCATTCCACGAAGTTCCGATGGAACCACAGCCTTTTTGAACTCCTGGCCCCTTGGACGGGTTTTGATTCATGTCGTTCGACACACGCGCCCTTGGACTTTAACACAGCGGGACATTCTCGAACCGCCTGAGAAGATGACAGAAGTGGCGAGCTCAGTGGTGCACGAGGTGCTGGGACGACGGGTTCAGGATGTGGATCAGCCGATTATTGATTATATTATCAACGTCCTGGCAGATGATGACTTTGATTTTGGAGACGATGGAGAAGGCGTCTTCGATTTTCTCGGGGAGCTACTCGTTAGTGCCGGCTGTGTCGACGACTTCTCTGAGTGTCGCACTGTATGTAGCAAATTGTCTGAAAAATTTGGGAAGCATGGGTTGGTCAAAGCCAAACCGACCGTGCGAAGCCTTGCAGCACCCTTCAGAATGGATGACGGAATGGATGATGGGGTAGCTCCTAAGAAGAAGCGTGAGCCTACCGATGGTCCTTTGCTAACTGAGCGTGACCGTGTAAAGCTAGAAAGAAGAAAGAGGAAGGATGAACGCCAAAGGGAGGCACAGTACCAAATGCATCTAGCAGAAATGGAAGCAGCCCGAGAAGGGATGCCTGTTGTATGTATTAGGCATGATAATAGTGGTGGAGCAGCTGTCAAGGACATTCACATGGAGAACTTCAATATTTCTGTTGGTGGCCGTGATCTCATTGAGGATGGTTCAATCACACTCTCATTTGGAAGGCATTATGGCCTCATTGGGAGAAATGGTACTGGGAAAACAACATTCCTCAGGCATATGGCTATGCATGCCATTGATGGTATACCAAATAATTGTCAGATATTGCATGTGGAACAAGAGGTAGTTGGTGACGATATAACAGCCTTGCAGTGTGTGCTCAATTCGGATATTGAGAGAACTCAACTTCTGGAGGAAGAAGCTCGATTACTTGCCCAACAGAGAGAGTTGGAGTCTGGGGATGTAAATGTAAAGGGCAATGATGCCATTTCACAGAGACTTGAGGAAATCTACAAGAGGCTTGAGTTAATTGATGCTTACTCTGCAGAGTCACGTGCAGCTTCAATACTTGCAGGCCTAAGCTTCTCTCCTGAGATGCAAAAGAGGCCGACAAAAACTTTCTCTGGAGGATGGCGGATGCGAATAGCTCTTGCTCGTGCACTATTTATAGAACCTGACTTGCTGCTTCTTGATGAACCTACGAACCATCTTGATCTTCATGCTGTCTTATGGTTGGAATCTTACTTGGTTAAGTGGCCAAAAACGTTCATAGTTGTTTCTCATGCAAGAGAATTTTTGAACACGGTGGTGACTGACATAATTTATCTACAAGCTAAGAAGTTGACTACTTATAAAGGGGATTATGATACTTTTGAGAAGACTCGAGAAGAACAGCTTAAAAACCAGCAAAAAGCAGTGGAGGCAAATGAACGCACAAGAGCTCATATGCAGTCTTTCATTGACAAGTTCCGTTATAATGCCAAGAGGGCATCGCTTGTTCAATCAAGAATTAAGGCTTTGGACCGGATGGGGCGTGTGGATGAAATTATCAATGATCCTGACTACAAGTTTGAGTTCCCAACTCCAGATGATAGACCTGGTGCACCAATAATAAGTTTTAGTGATGCATCGTTTGGTTACCCTGGGGGCCCAATTCTATTTAAGAATTTGAATTTTGGGATTGATCTTGACAGCCGTATTGCAATGGTTGGACCCAATGGTATTGGTAAATCTACCATACTTAAGTTAATTGCAGGGGAACTACAACCCATTTCTGGGACAGTTTTTCGTTCTGCCAAGGTTCGGATAGCAGTCTTCAGTCAGCATCACGTTGATGGACTAGACTTATCTTCGAATCCCCTTTTGTACATGATGCGCTGCTATCCTGGTGTTCCTGAACAGAAGCTTCGAGCTCACTTGGGCTCTTTTGGTGTAACTGGAAATCTTGCACTTCAGCCAATGTATACACTGTCAGGGGGACAAAAGAGCAGGGTTGCATTTGCGAAGATAACTTTCAGGAAACCACACATAATATTGCTTGATGAACCTTCCAATCACCTGGACTTGGATGCTGTTGAGGCACTAATTCAGGGTCTTGTAATGTTCCAAGGAGGCATTCTAATGGTGAGTCACGATGAGCACCTAATATCTGGAAGCGTGGAGGAGCTATGGGTTGTATCCCAAGGAAGAGCGAGCCCATTCCATGGCACCTTCCAAGATTATAAGAAGATACTCCAGTCATCATAG 2319 0.4493 MLQCKGLVWIPYILFSSSFAFIPRSSDGTTAFLNSWPLGRVLIHVVRHTRPWTLTQRDILEPPEKMTEVASSVVHEVLGRRVQDVDQPIIDYIINVLADDDFDFGDDGEGVFDFLGELLVSAGCVDDFSECRTVCSKLSEKFGKHGLVKAKPTVRSLAAPFRMDDGMDDGVAPKKKREPTDGPLLTERDRVKLERRKRKDERQREAQYQMHLAEMEAAREGMPVVCIRHDNSGGAAVKDIHMENFNISVGGRDLIEDGSITLSFGRHYGLIGRNGTGKTTFLRHMAMHAIDGIPNNCQILHVEQEVVGDDITALQCVLNSDIERTQLLEEEARLLAQQRELESGDVNVKGNDAISQRLEEIYKRLELIDAYSAESRAASILAGLSFSPEMQKRPTKTFSGGWRMRIALARALFIEPDLLLLDEPTNHLDLHAVLWLESYLVKWPKTFIVVSHAREFLNTVVTDIIYLQAKKLTTYKGDYDTFEKTREEQLKNQQKAVEANERTRAHMQSFIDKFRYNAKRASLVQSRIKALDRMGRVDEIINDPDYKFEFPTPDDRPGAPIISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPISGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCYPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFRKPHIILLDEPSNHLDLDAVEALIQGLVMFQGGILMVSHDEHLISGSVEELWVVSQGRASPFHGTFQDYKKILQSS 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0799 772 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 218 771 - -
Lele51g0799 772 Pfam ABC transporter 258 426 IPR003439 GO:0005524
Lele51g0799 772 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 544 761 IPR027417 -
Lele51g0799 772 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 240 498 IPR027417 -
Lele51g0799 772 ProSitePatterns ABC transporters family signature. 398 412 IPR017871 GO:0005524|GO:0016887
Lele51g0799 772 SMART AAA_5 587 754 IPR003593 -
Lele51g0799 772 SMART AAA_5 264 471 IPR003593 -
Lele51g0799 772 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 562 771 IPR003439 GO:0005524
Lele51g0799 772 Gene3D - 525 772 IPR027417 -
Lele51g0799 772 Gene3D - 194 507 IPR027417 -
Lele51g0799 772 FunFam ATP-binding cassette sub-family F member 3 524 772 - -
Lele51g0799 772 Pfam ABC transporter 579 709 IPR003439 GO:0005524
Lele51g0799 772 Pfam ABC transporter 467 545 IPR032781 -
Lele51g0799 772 CDD ABCF_EF-3 240 471 - -
Lele51g0799 772 ProSitePatterns ABC transporters family signature. 681 695 IPR017871 GO:0005524|GO:0016887
Lele51g0799 772 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 240 494 IPR003439 GO:0005524
Lele51g0799 772 FunFam ABC transporter F family member 3 192 507 - -
Lele51g0799 772 CDD ABCF_EF-3 562 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0799 Lele-ChrLele51 4815385 4826646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0799 519 723 Calmodulin-binding Proteins AT2G36910 26.582 2.41e-10 62.4