Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0788 ATGAGTGTCCCTGAAACCCCAACCACATCTCCAAATCTGTATCCACAAGAACTTGAGTTAAAACTATACCAAGCCTTCTTTTTCTCAATTCCAATCCTATTTTCAATCATTCTCTTTCTCTTGTTCTATTTGTTCTACCTTAAGCGCAGAGCTTCTCTCTCTTCCCCTCCTCACTTTCTTCCCACCTCTGCTCCTTCAACTACCTCTCATTCCACTCCTTGTCGTTTGGATCTGACGCTTCAGTTCCTTGACACTCTTCCAAAAGTTTTATTTGGTGAAGAATTGAAAGCAAGAGATTCACAATGTTGCATATGTCTGGGAGAATTTGAGATAAAAGATGAGGTATTGCAGATTCCTGAGTGCAAGCATGTATTTCACAGAGAATGCATTTACCACTGGCTTCATTCACACACGACTTGTCCACTGTGTAGATGTTGCATCATCCCACCCACCAAGTTTCTGAATCCACCACCCCTCCTTCCTCCTCCTCCTCCTCTTGCAGATGAAGCTTCTTCTTAA 519 0.4258 MSVPETPTTSPNLYPQELELKLYQAFFFSIPILFSIILFLLFYLFYLKRRASLSSPPHFLPTSAPSTTSHSTPCRLDLTLQFLDTLPKVLFGEELKARDSQCCICLGEFEIKDEVLQIPECKHVFHRECIYHWLHSHTTCPLCRCCIIPPTKFLNPPPLLPPPPPLADEASS 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0788 172 Pfam Ring finger domain 101 144 IPR001841 -
Lele51g0788 172 ProSiteProfiles Zinc finger RING-type profile. 102 144 IPR001841 -
Lele51g0788 172 SMART ring_2 102 143 IPR001841 -
Lele51g0788 172 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 149 IPR013083 -
Lele51g0788 172 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 16 154 - -
Lele51g0788 172 SUPERFAMILY RING/U-box 80 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0788 Lele-ChrLele51 4755516 4757106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0788 3 149 C3H Transcription Factor Family AT4G10150 38.667 5.54e-35 120