Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0786 ATGTTGAATCGTGGAGGGTCTTTTTCGATGTCTTCGGCTGAAGGTGGTTGTGGAGGAGATGATCTGTATGAAGAACTATGGAAGGCCTGTGCAGGACCTCTTGTCGACGTTCCTTGCGCCGGCGAGAGGGTGTTCTATTTTCCACAAGGACACATGGAGCAATTGGAGGCATCAACAAATCAAGAACTTAATCATAGGATTCCGGTGTTCAACCTTCCATCAAAGATCCTTTGTCGCGTGGTGAACGTCCATCTACTGGCTGAACAAGAAACTGACGAGGTTTACGCCCAAATTACTCTGGTGCCAGAATCCAATCAAAATGAGCCTACTAGCCCAGATCCAAGCCCTGCTGAACTTCCAAAGCCAGCAGTTCATTCATTCTGCAAGGTTTTGACGGCATCTGATACAAGCACCCATGGTGGATTCTCTGTGCTCAGAAAACACGCAACTGAATGCCTTCCTTCTCTGGACATGTCCCAACCAACTCCTACTCAGGAATTGGTTGCCAAAGATCTTCACGGTTATGAGTGGCGCTTTAAGCATATATTCAGAGGTCAGCCTCGTAGACATTTGCTCACAACTGGATGGAGTACTTTTGTTACTTCAAAGAGATTAGTTGCTGGAGATACCTTCGTGTTTTTAAGAGGGGTCAATGGAGAATTACGTGTTGGAGTGAGGCGTCATGTTCGTCAGCAGATTAGCATGCCATCATCCGTAATTTCCAGTCAGAGTATGCACCTAGGAGTTCTTGCAACTGCCTCTCATGCCGTTGCAACCCAAACTCTTTTTGTTGTATACTATAAACCAAGGACAAGTCAATTTATCATAAGCGTAAACAAGTATTTGGAGGCTATCAACAATAAGTTTACTGTTGGTATGAGGTTCAAGATGAGGTTTGAAGGGGATGAGTCTCCTGAAACTGACAAGAGGTTTTCGGGTACTATTATTGGAGCGGAAGATATTTCTCCTCACTGGGTAAATTCGAGCTGGCGATCACTCAAGGTTCAGTGGGATGAACCTGTAGCTGTTCCAAGACCAGATAAGGTTTCACCATGGGAAGTGGAACCTTTTCTTGCTCCCGTCACTTCATCTTCGGTTCAACCTCCCATTGTAAAGACTAAGAGACCTCGACCACCACCCAGTGAAATTCCGGATCTTGACACAACTTCCACTGCTTCTGCTTTCTGGAATTCTGAGCTGATGCAATCCGATATTACCCAACTCGGAGTTATGGCTGAAAACAATAGGAGGGACAATTCTGGCATGTGGCATCACAGTCAAGCTGACATGAATAGTAAAAGCAGCAGCAACACTCTTTCAAGAAATCAAACAGAAGGGAGTTGGCTATCTTCTCCCCACTTAAGCAGTCCTCCACAACTGTTGCAGGACACCACAGATGACGGCAAGAGTGTCTCTGCTTGGCCTGTTCACTCAGTTCATTCAACACCTCACTCATCGCGACTGAACAATGATCATATTCTTGAACAAGCTGGCAGGGAGAATAAAGTTGAGATCGCTACAAGCTGTCGATTGTTTGGGATTGAGCTTATCGGTCATTCCCAAAATTCAACTTCTATGGAGAAGGCACCTGCACATGCAGCTGGTATGCTTAATGGCCCTTCTGAAAGTCATGTCAATGCCTTGTCCGGAACTGATTCAGATCGTAAGTATAACATCTCAAAGGCTTCCTATGAGGGGAAACAAGAACATCTGCAAGTAAAGGAGACTCAGAGCAAGCAAATATGTTCCAGAAGTCGCACCAAGGTTCAAATGCAGGGGGTCGCAGTGGGTCGTGCTGTGGACTTGGCCATGTTGGATGGTTATGATCAACTTATCAATGAGTTGGAGGAGATGTTTGACATAGAAGGACAACTTAAACATAGGAAGAAGTGGGAAATTGTCTTCACTGATGATGAAGGGGATATGATGCTCGTGGGCGATGATCCATGGCCTGAATTCTGTAATATGGTGAGAAGAATCTTCATTTGTTCCAGCCAGGATGTGAAGAAGATGAATACGGGAAGCAAATTGCCTATTTCATCAATGGAGGGGGATGGGACTGTAATAAGTGGGAGCACAGATGAAACCTGA 2091 0.4534 MLNRGGSFSMSSAEGGCGGDDLYEELWKACAGPLVDVPCAGERVFYFPQGHMEQLEASTNQELNHRIPVFNLPSKILCRVVNVHLLAEQETDEVYAQITLVPESNQNEPTSPDPSPAELPKPAVHSFCKVLTASDTSTHGGFSVLRKHATECLPSLDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGVNGELRVGVRRHVRQQISMPSSVISSQSMHLGVLATASHAVATQTLFVVYYKPRTSQFIISVNKYLEAINNKFTVGMRFKMRFEGDESPETDKRFSGTIIGAEDISPHWVNSSWRSLKVQWDEPVAVPRPDKVSPWEVEPFLAPVTSSSVQPPIVKTKRPRPPPSEIPDLDTTSTASAFWNSELMQSDITQLGVMAENNRRDNSGMWHHSQADMNSKSSSNTLSRNQTEGSWLSSPHLSSPPQLLQDTTDDGKSVSAWPVHSVHSTPHSSRLNNDHILEQAGRENKVEIATSCRLFGIELIGHSQNSTSMEKAPAHAAGMLNGPSESHVNALSGTDSDRKYNISKASYEGKQEHLQVKETQSKQICSRSRTKVQMQGVAVGRAVDLAMLDGYDQLINELEEMFDIEGQLKHRKKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKMNTGSKLPISSMEGDGTVISGSTDET 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0786 696 MobiDBLite consensus disorder prediction 365 388 - -
Lele51g0786 696 Gene3D - 580 672 - -
Lele51g0786 696 SMART B3_2 127 229 IPR003340 GO:0003677
Lele51g0786 696 CDD B3_DNA 125 227 IPR003340 GO:0003677
Lele51g0786 696 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Lele51g0786 696 SUPERFAMILY DNA-binding pseudobarrel domain 117 256 IPR015300 -
Lele51g0786 696 MobiDBLite consensus disorder prediction 424 488 - -
Lele51g0786 696 FunFam Auxin response factor 125 229 - -
Lele51g0786 696 ProSiteProfiles PB1 domain profile. 584 665 IPR000270 GO:0005515
Lele51g0786 696 Pfam Auxin response factor 253 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele51g0786 696 MobiDBLite consensus disorder prediction 417 488 - -
Lele51g0786 696 FunFam Auxin response factor 579 672 - -
Lele51g0786 696 MobiDBLite consensus disorder prediction 673 696 - -
Lele51g0786 696 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Lele51g0786 696 SUPERFAMILY CAD & PB1 domains 585 660 - -
Lele51g0786 696 Gene3D - 124 229 IPR015300 -
Lele51g0786 696 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 21 672 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele51g0786 696 FunFam Auxin response factor 288 361 - -
Lele51g0786 696 Gene3D - 288 361 - -
Lele51g0786 696 Pfam AUX/IAA family 555 620 IPR033389 -
Lele51g0786 696 Pfam AUX/IAA family 628 668 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0786 Lele-ChrLele51 4749047 4752669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0786 18 677 B3 DNA Binding Superfamily AT4G23980 58.533 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele51g0786 AUX_IAA 1.5e-12 CL0072