Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0782 ATGGACGCTGAAATGAAAGGACGAATCGAGACCACTGTTCGGAGGATTCTGGAAGGATCAAACATGGATGAGGTCACGGAGTCCAAAATTAGGAAGCTTGCCGCCAAAGAACTCGACCTCGACCTTTCGCAGTCGCATTACAAAGCCTTTGTGAAGCAGGTTGTGGAGTCTTTCATTCAGGAAAAGCAAGAAGAGCAGGAGGAGGAAGAAAATTCACAAGAGCAAACTGCTCAAGACCAGGAGTACGATGATGAAGGCAATCTCATTATCTGCAAGCTTTCAGCTCAGAGAAGGGTGACGATTCAAGAATTCAGAGGGAAAACATTGATCTCTATTCGGGAGTACTATAGAAAGGACGGTAAAGAACTTCCTTCTTCGAAAGGAATAAGCTTGACGGAGGAGCAGTGGTCGGCCTTGAAGAAGAATATACCTGCCGTAGAAAAAGCAGTTCAGAAACTGGAGTCGAACATGTGA 474 0.4557 MDAEMKGRIETTVRRILEGSNMDEVTESKIRKLAAKELDLDLSQSHYKAFVKQVVESFIQEKQEEQEEEENSQEQTAQDQEYDDEGNLIICKLSAQRRVTIQEFRGKTLISIREYYRKDGKELPSSKGISLTEEQWSALKKNIPAVEKAVQKLESNM 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0782 157 Coils Coil 143 157 - -
Lele51g0782 157 Pfam DEK C terminal domain 8 59 IPR014876 -
Lele51g0782 157 MobiDBLite consensus disorder prediction 62 82 - -
Lele51g0782 157 PIRSF RNA_polymII_KELP 1 157 IPR017415 -
Lele51g0782 157 Pfam Transcriptional Coactivator p15 (PC4) 91 142 IPR003173 GO:0003677|GO:0006355
Lele51g0782 157 SUPERFAMILY ssDNA-binding transcriptional regulator domain 90 153 IPR009044 GO:0003677|GO:0006355
Lele51g0782 157 MobiDBLite consensus disorder prediction 62 81 - -
Lele51g0782 157 Gene3D Transcriptional Coactivator Pc4; Chain A 80 157 IPR009044 GO:0003677|GO:0006355
Lele51g0782 157 FunFam RNA polymerase II transcriptional coactivator KELP 80 156 - -
Lele51g0782 157 Gene3D - 5 62 - -
Lele51g0782 157 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 5 155 IPR045125 GO:0003713|GO:0060261
Lele51g0782 157 Coils Coil 55 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0782 Lele-ChrLele51 4721306 4722967 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Lele51g0782 DEK_C 5e-13 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0782 51 4721306 4722967 Lele51g0782 51 4721306 4722967 ECH
Lele49g0758 49 4597900 4599809 Lele51g0782 51 4721306 4722967 hybridization
Lele50g0801 50 4923829 4926037 Lele51g0782 51 4721306 4722967 hybridization