Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0747 ATGGAGGATGACAGGAGGTGGGAGCCGAGCACACTAACGAATGAGCTACTTCAAGGAATGGAGGCAGCGAGGAAGTTGATGGCGGATTTTAGGACAGAATCTTCGGCAGAGACCAGGGATTTGCTGGTACAGAGAATATTGTCATCTTATGAAAAGGCTCTGCTAATTCTGAAATGGAATGCGTCAAATACCAGCCCTCTTCCCACGGGGACAGTAACAGTACCTAGTTTTCCGCCGGAGTCTCCGATATCTGTCAACGCAAGTCCTTTCAGAGATGACAATGATGGGGATCATCATGAGCTTATACCCGATTCCAAGAAAAGAAAGATGATGCCCACATGGATGGAACAAGTAAGATCGAGCTCTGAGTCTGCCCTTGAAGGACCCCAAGATGATGGCTTCAGCTGGAGAAAATATGGACAGAAAGACATCCTGGGTGCCAAATATCCTAGAAGTTACTATAGATGCACCTTCCGCAAGACTCAGAACTGCTGGGCCACGAAGCAAATACAAAGATCAGATGAAGACCCTACTGTGTTTGACATCACTTACCGAGGAAGGCATACTTGTTCCCTGGGAAATAATGCTGTTCAACCACCTAAGTCTCCAGACAAACAGGAGAAAATGCATAATTATGAAAGGGACATGTGCCATCACGAGCCGTTGCAAGAGAGCCTAGTGAAATTCAGAAATAACTTGAGTGTCAATACAGATAACCTTGAAAACCACGAGATGGGGAATCCTTTTACTTTCCTTTCAACTTCCTCTGGATACATGACACCAGAAAGCCACAGCTTAACTCCCATGGCACTAGAGAATGATCCATTCTGGGGAAACCTTTCACAAACAGACTTGCCATCTCCAAACACGCCACAATCACACTATTTTCCATCTCTGTCTTTCAAGATGGATGAGTTCCATGGCATAAAAAACCAGCGATGCTCAGAATCTGACATTACTGAGATCGTTTCAGCCAACACATCAGCCAGCAATTCTCCAATTCTGGATTTTCATTTCCCTATTGATCCAGTGGAAATTGATCCGAATTTCCCTTTTGACACACCGGGACTTTTCCCATGA 1080 0.45 MEDDRRWEPSTLTNELLQGMEAARKLMADFRTESSAETRDLLVQRILSSYEKALLILKWNASNTSPLPTGTVTVPSFPPESPISVNASPFRDDNDGDHHELIPDSKKRKMMPTWMEQVRSSSESALEGPQDDGFSWRKYGQKDILGAKYPRSYYRCTFRKTQNCWATKQIQRSDEDPTVFDITYRGRHTCSLGNNAVQPPKSPDKQEKMHNYERDMCHHEPLQESLVKFRNNLSVNTDNLENHEMGNPFTFLSTSSGYMTPESHSLTPMALENDPFWGNLSQTDLPSPNTPQSHYFPSLSFKMDEFHGIKNQRCSESDITEIVSANTSASNSPILDFHFPIDPVEIDPNFPFDTPGLFP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0747 359 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 10 287 IPR044810 GO:0003700
Lele51g0747 359 ProSiteProfiles WRKY domain profile. 125 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele51g0747 359 SUPERFAMILY WRKY DNA-binding domain 129 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele51g0747 359 Gene3D WRKY domain 115 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele51g0747 359 FunFam WRKY transcription factor 53 116 193 - -
Lele51g0747 359 SMART WRKY_cls 130 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele51g0747 359 Pfam WRKY DNA -binding domain 131 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0747 Lele-ChrLele51 4523851 4525110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0747 7 242 WRKY Transcription Factor Family AT4G23810 49.042 2.03e-66 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele51g0747 WRKY 4.4e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0726 49 4423104 4424360 Lele51g0747 51 4523851 4525110 hybridization
Lele50g0766 50 4721822 4723024 Lele51g0747 51 4523851 4525110 hybridization