Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele51g0744 | ATGGCTGAGATAATTGCCGAAGTGTCCTTCGATCAAGTCCCGTCGAGGAAGCAGAGAAGCCGAAGAGCGTTGAAGGATAAAAATCCCTCAACCAATGATGTCAAATCCTTGGCCAAGAAGCTGCCCGATTCCTCCTCACCACCGTTTTCTATGGAATCAGACGCCGGAAAGGAGAACCAACCCAGCGCCTCTCAACCCCGCTCCTCAGCCAAGAAGGGAAAAGCTGCCTCCAAGAAACAGTCAAAGCAATCTTTTGAGAAAGATTTGCTAGAAATGCAGGAGATGCTGCAGAAGTTGCGCCTTGAGAAGGAGAAGACTGAAGAGCTCTTGAAGGTCAAAGATGAGATGTTGAAGCAGAAGGAAGAAGAGCTTGACGAGCGTGGCCGCGAGCGGGAGAAGCTTCAGATTGAGTTGAAAAAATTACAGAAGCTCAAGGAGTTCAAACCCACCATGAATTTGCCTGTGCTGAGAGACCAGGAGCAAGAAAAGGATAAGAAGAAGAAGAATGGATGTGCTGTGAAAAGGCCTTCTCCACCTTACATTTTGTGGAGCAAAGATCAATGGGCTGAGATTAAGAAAGTGAATCCAGTGGCAGAATTCAAGGAAATTTCAAATATGTTAGGGTCTAAATGGAAGACCATCAGTGAAGAAGAGAAACGGCCTTATGAGGAGAAATATCTCATTGAGAAAGAAGCGTATCTGCGGGTAATCACGAAGGAGAAACGTGAAAGTGAAGCGATGAAGCTCCTAGAAGAGGAACAAAAGCAGAAGACTGCCATGGAATTGCTCGAACAGTACATGCTGTTCAAACAAGAAACAGAGAAAGAAAGCAAGAAAAACGGAAAAGAGAAGGATCCACTGAAACCAAAGCATCCTGTGTCAGCTTTCATCTTGTACACAAATGATAGGCGGGCAGCTATTCTTGCGGAGAACAAGAGTATCTTGGAGGTTTCAAAGATTTCTGGTGAGGAGTGGAAGAACATGACAGAAGAACAGAAGAGACCTTATGAAGAGATGGCAAGGAAGAATAAGGAGAAATATCTTCAAGAAATGGAGGTTTACAAACAGAAGAAGGATGAGGAGGCTGCGAATCTCAGGAAGGAAGAGGAGGAGAAAATGAAACTTCAGAAAGAAGAAGCCTTGAAACTGCTGAAGAAGAAGGAGAAAACAGAAAATCTGATCAAGAAGTCAAAGAGAAAGAAAAAGAGCAAGGAAGATAAGAATTGTGATCCTAACAAGCCAAAGAGACCACCATCCTCGTTTCTGCTATTTAGCAAAGAAGCAAGGAAGAGCATACAGGAGGAACGACCAGAGATGAATAACTCAACGGTGACCGCACTTGTATCGGTGAAATGGAAGGAACTGAGCGAGGAAGAGAGAAAAGTGTGGAACGACAAAGCCGCGGAGGCAATGGAGGCATACAGGAAGGAATTGGAGGAGCACAATAAATGCATAGCAGCTAAGTTGGACCAGAAAACAGAAGAATGA | 1488 | 0.4442 | MAEIIAEVSFDQVPSRKQRSRRALKDKNPSTNDVKSLAKKLPDSSSPPFSMESDAGKENQPSASQPRSSAKKGKAASKKQSKQSFEKDLLEMQEMLQKLRLEKEKTEELLKVKDEMLKQKEEELDERGREREKLQIELKKLQKLKEFKPTMNLPVLRDQEQEKDKKKKNGCAVKRPSPPYILWSKDQWAEIKKVNPVAEFKEISNMLGSKWKTISEEEKRPYEEKYLIEKEAYLRVITKEKRESEAMKLLEEEQKQKTAMELLEQYMLFKQETEKESKKNGKEKDPLKPKHPVSAFILYTNDRRAAILAENKSILEVSKISGEEWKNMTEEQKRPYEEMARKNKEKYLQEMEVYKQKKDEEAANLRKEEEEKMKLQKEEALKLLKKKEKTENLIKKSKRKKKSKEDKNCDPNKPKRPPSSFLLFSKEARKSIQEERPEMNNSTVTALVSVKWKELSEEERKVWNDKAAEAMEAYRKELEEHNKCIAAKLDQKTEE | 495 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele51g0744 | 495 | Coils | Coil | 337 | 407 | - | - | |
Lele51g0744 | 495 | MobiDBLite | consensus disorder prediction | 157 | 171 | - | - | |
Lele51g0744 | 495 | MobiDBLite | consensus disorder prediction | 46 | 71 | - | - | |
Lele51g0744 | 495 | SUPERFAMILY | HMG-box | 400 | 480 | IPR036910 | - | |
Lele51g0744 | 495 | Coils | Coil | 82 | 144 | - | - | |
Lele51g0744 | 495 | MobiDBLite | consensus disorder prediction | 355 | 374 | - | - | |
Lele51g0744 | 495 | ProSiteProfiles | HMG boxes A and B DNA-binding domains profile. | 173 | 241 | IPR009071 | - | |
Lele51g0744 | 495 | MobiDBLite | consensus disorder prediction | 1 | 89 | - | - | |
Lele51g0744 | 495 | SMART | hmgende2 | 288 | 356 | IPR009071 | - | |
Lele51g0744 | 495 | SMART | hmgende2 | 172 | 242 | IPR009071 | - | |
Lele51g0744 | 495 | SMART | hmgende2 | 413 | 483 | IPR009071 | - | |
Lele51g0744 | 495 | MobiDBLite | consensus disorder prediction | 152 | 173 | - | - | |
Lele51g0744 | 495 | CDD | HMGB-UBF_HMG-box | 174 | 237 | - | - | |
Lele51g0744 | 495 | CDD | HMGB-UBF_HMG-box | 289 | 352 | - | - | |
Lele51g0744 | 495 | Pfam | HMG (high mobility group) box | 289 | 355 | IPR009071 | - | |
Lele51g0744 | 495 | Pfam | HMG (high mobility group) box | 414 | 480 | IPR009071 | - | |
Lele51g0744 | 495 | Pfam | HMG (high mobility group) box | 173 | 235 | IPR009071 | - | |
Lele51g0744 | 495 | Coils | Coil | 464 | 495 | - | - | |
Lele51g0744 | 495 | MobiDBLite | consensus disorder prediction | 14 | 33 | - | - | |
Lele51g0744 | 495 | Gene3D | High mobility group box domain | 394 | 492 | IPR036910 | - | |
Lele51g0744 | 495 | Gene3D | High mobility group box domain | 157 | 261 | IPR036910 | - | |
Lele51g0744 | 495 | Gene3D | High mobility group box domain | 272 | 368 | IPR036910 | - | |
Lele51g0744 | 495 | ProSiteProfiles | HMG boxes A and B DNA-binding domains profile. | 414 | 482 | IPR009071 | - | |
Lele51g0744 | 495 | ProSiteProfiles | HMG boxes A and B DNA-binding domains profile. | 289 | 355 | IPR009071 | - | |
Lele51g0744 | 495 | SUPERFAMILY | HMG-box | 282 | 360 | IPR036910 | - | |
Lele51g0744 | 495 | CDD | HMG-box | 414 | 479 | - | - | |
Lele51g0744 | 495 | MobiDBLite | consensus disorder prediction | 386 | 440 | - | - | |
Lele51g0744 | 495 | PANTHER | HIGH MOBILITY GROUP B PROTEIN 13 | 6 | 491 | IPR044601 | GO:0003677 | |
Lele51g0744 | 495 | SUPERFAMILY | HMG-box | 162 | 236 | IPR036910 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele51g0744 | Lele-ChrLele51 | 4509171 | 4511237 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | HMG | Lele51g0744 | HMG_box | 2.2e-17 | CL0114 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele51g0744 | 51 | 4509171 | 4511237 | Lele51g0744 | 51 | 4509171 | 4511237 | ECH | |
Lele49g0723 | 49 | 4406891 | 4408959 | Lele51g0744 | 51 | 4509171 | 4511237 | hybridization | |
Lele50g0763 | 50 | 4704509 | 4706618 | Lele51g0744 | 51 | 4509171 | 4511237 | hybridization |