Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0737 ATGACTGCGCCTTCCATCAGATTCGCCCGCCACACTAAACTCGCCACGGCGGAGGAGCAACACCATCTGTGCCGAGGAATGGAGTATCCCAGAGTTGTTAGAATATGCGTGACAGACGGCGATGCCACGGATTCCTCCAGCGACGAAGAAGGAGGGCCTGTCACGCGCCACCGCGGTAGGAGGTTCGTCAACGAGATTACCATCACCCAAATCGATGTCGTTGCTAAGCCTGAGAGCAAGCGTCGGAAGAGCAATAGGAGTAGAGTAATGGGAAGTCGGCGGCCTATGAAGGCAGCGGCGGGGAAGAAGTTCAGAGGAGTGAGACAAAGGCCGTGGGGGAAATGGGCGGCGGAGATCAGAGATCCTCTGCGACGTGTACGGTTGTGGTTGGGAACATACGAAACTGCAGAGGAAGCTGCGATGGTGTACGATAAGGCAGCCATTAAGCTGAGAGGAGCAGAGGCACTGACCAATTTCATAACGCCACCGGGGAAGGAGGAGAGCGAGGAGAAGAGAACGTTGAGTTCCCCGAAATCTGTTCTTCAGTCTCAGAGTGGTAGTTTGTCAGAGGAGGTTGAATCTGTAACAACAACCAAAGATGACACGATCAGTGAATGTCGGGACGAATCACCGTCCTCATCATCGTCGACAGGGTTATCGGAGAATTTCTCAGGGTTTCCGGCGGACATATTCGACTTCCGGACATCGTTGCCGGATATATTTGACGAGACAAATATCACCGAAAGCATCTACTCCAATGCGTGGATGAGTCCGACGGAAAACTTCAACTTGGGTTTGGATTTCGAATCGGGTTTCGGATCTTCGAGTTGGCATAGAGACGATTATTTCCAAGATATCGGCGATTTGTTTGTTACAGATCCGCTTGTTGCTCTGTGA 897 0.5195 MTAPSIRFARHTKLATAEEQHHLCRGMEYPRVVRICVTDGDATDSSSDEEGGPVTRHRGRRFVNEITITQIDVVAKPESKRRKSNRSRVMGSRRPMKAAAGKKFRGVRQRPWGKWAAEIRDPLRRVRLWLGTYETAEEAAMVYDKAAIKLRGAEALTNFITPPGKEESEEKRTLSSPKSVLQSQSGSLSEEVESVTTTKDDTISECRDESPSSSSSTGLSENFSGFPADIFDFRTSLPDIFDETNITESIYSNAWMSPTENFNLGLDFESGFGSSSWHRDDYFQDIGDLFVTDPLVAL 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0737 298 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 30 206 - -
Lele51g0737 298 PRINTS Ethylene responsive element binding protein signature 104 115 IPR001471 GO:0003700|GO:0006355
Lele51g0737 298 PRINTS Ethylene responsive element binding protein signature 126 142 IPR001471 GO:0003700|GO:0006355
Lele51g0737 298 MobiDBLite consensus disorder prediction 160 221 - -
Lele51g0737 298 CDD AP2 102 159 IPR001471 GO:0003700|GO:0006355
Lele51g0737 298 FunFam Ethylene-responsive transcription factor 2 102 161 - -
Lele51g0737 298 MobiDBLite consensus disorder prediction 77 103 - -
Lele51g0737 298 MobiDBLite consensus disorder prediction 175 193 - -
Lele51g0737 298 Pfam AP2 domain 103 152 IPR001471 GO:0003700|GO:0006355
Lele51g0737 298 Gene3D AP2/ERF domain 102 161 IPR036955 GO:0003700|GO:0006355
Lele51g0737 298 SUPERFAMILY DNA-binding domain 103 159 IPR016177 GO:0003677
Lele51g0737 298 SMART rav1_2 103 166 IPR001471 GO:0003700|GO:0006355
Lele51g0737 298 ProSiteProfiles AP2/ERF domain profile. 103 160 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0737 Lele-ChrLele51 4463122 4464018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0737 1 298 AP2-EREBP Transcription Factor Family AT4G23750 40.616 2.05e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele51g0737 AP2 4.3e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0717 49 4361353 4362246 Lele51g0737 51 4463122 4464018 hybridization
Lele50g0756 50 4659277 4660176 Lele51g0737 51 4463122 4464018 hybridization