LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele51g0719	ATGGGACGGATTCTAAGCGCTTCGGTTTTCAAATTGAAGAGCCGACGTGATCGCCAACACCCTTGTGCAGAGCATGCCGCTGCTGGAGCAAATAGGGGAAAAGAGGGATCCAATATAACTAACCAGAAAAAGGAAAAAATTGAGAAGCCAAACAAATGCTACAATTCTGACGATTTGGATAGAGAACGAGGTGTTGCCGCCATGGTGGAGTGCAGATATCAACGTAAAGCAGTTCTCTTTTTGGCACTCCAGAGTTTAGGCTTTCTGCTTGGTAACCTAAGCATCTCCCCGCTTTATGTATATCAAAGTATATTTTCTGGTAGACTGCAAAATATTCAAAATGAGGATGCAGTATTTGGCGCATTCTCTCTGATTTTTTGGACTCTCTCTCTTATGTCATTTTTCAAGTATATCATTATGGTGCTGGATGCAGACGATAATGGAGAAGGGGGAATTATTGCTTTGTATTCACTTCTTTGCAGAAATGCAAAATTTTGTCTGCTACCTAATCATCAAGCATCTGATGAGGAGCTGTATACATATCATAAACCTGGTTGCACAAATAGAGATATACCATCCTCACCTTTGAAAAGACTGATTGAGAGGCATAAGATTACAAAACCTGCTTTGCTTATTCTCGTTCTCCTGGGTGCATGTATGGTGGTTTGTGTTGGTGCACTGACACCTGCTATTTCTGGTAAGGAAACATTCATTACATCATCTGTTCTTGCATCTATTAAAGGGCTGGAAATCCAGGCAAAGGTCTTTAACTTGGATACCTTCCCTCTTTTAACTCTTATACACCAAGCTCATTATGTTATGCTAGTGTTGCAACTGACAGCAAGAAACAATCATGATCTTTTGTTTAAGTTTCCAGTTGTGACATATGGAGTGGAGCCAGTATTTTCCCTGGCAGCACCTATTGCAGACAATTGCCAGTTGCAATTGCAGGGGGAGGGAGTAAGTATTTTGCTTCTTATTTCTTGTGTTCTATTGGTTGGACTCTTTGTACTGCAACACCGTGGTGCCCACAATGTCGCCTTCATGTTTCCTCCTATTGTGATCCTGTGGTTACTGTTTAATTTCATGATTGGCATTTACAATGTCATCAAATGGAATCCAAGAGTATATCAGGCTCTATCTCCATATTATATATATAGGTTCTTTCAGGTTACAGGAAAAGATGGTTGGGCTAATCTTGGAGGAGTATTTTTGTGTGTTACAGGGACTGAAGCTATGTTTGCAGACCTAGGATACTATGGGCAAGCACCTATAAGGGTTGCATTTTGTTGTATTATTTATCCATGTCTAGTCCTTCAATACATGGGGCAGGCTGCATTTCTTTCCAAGAATTTCTCTGCAGTGCGTATAAGCTTTTATGCTTCCATTCCAGACGTCCTTTTTTGGCCAGTATTTGTGGTGACTGTTTTGACAGCAATAGTTGCAAGTCAGGCTGTTATCTCTGCAGCATTCTCAATTGTCAAACAATGCCACGCATTTCATTGTTTCCCTCGTGTTAAGTTTGTACATTCCAGACGGTGGATCCAAGGGCAGACATACATACCAGAGATAAACTGGATTCTTATGATTATCAGCCTGGCTGTGACTATTGGTTTTGGAGATCCAATCCGTATAGGATATGCTTATGGGATTGCTTGTCTAATTGTCACATATGTGACCACATGGCTGACATCGCTAGTCATCAACCTTGTATGGCATCTAAGTATTGTAGCTGCTCTTGCATTTCTTTTATTCTTTGGTTCAATAGAGGTTCTCTTCCTTTCCTCTTATTGCATGAAAATCCCAAAAGGTGGCTGGGTTCCGCTAGTGCTCTCTGCAGTTTTCTTGGTGGTTATGTTTGTGTGGCATTATGGTTCTAGGAAAAAGTATTTATTTGACATGCATAACAAAGTTTCCATGAAGTGGATCCTTACACTGGGCCCTAGTCTTGGGATTGTTAGGGTCCCAGGAATGGGCCTCATCTACACTGAATTAGCTGCTGGAATACCGGCAACTTTCACCCACTTCTTGACCAATTTGCCAGCTTTTTACCAAGTGGTTGTTTTTGTTTGTGTTAAGACTGTACCTGTGCCCCATGTACCACATAAGGAACGTTACCTCATTGGCAGAATTGGTCCAAAATCATACCGAATGTACCGGTGCATTGTTCGAAATGGTTATAAAGATGTTTACAACAATGAAGCTGATTTTGAGAATGACCTGGTGCTTAGCATAGCAGAATTCATCCAATTGGAAGCAGAAGGTGGTTCTAGAAACCTAGAGGGTTCTGTGGATGGCCGGATGGCGGTGGTTAAAACATCTGGAAAGTTTGGGAAAAGATTGTTAATGTCAGAATCTGCTATTACTGAAGGAGGCAGTAGTTTGAGTCTTCCTGGAACCTTGACGGTAAGCAGCAGCAAGTCACCGACGCTGAAGAGGTTGCAGGCCATGTATGAACAGGAATCACCTGAACTCCACAATAGGAAACGTATCCGATTTGAGCTGCTAAATACAATATATATAGATCCACGTGTGAAGGAGGAGCTTCTGGAGCTTGTAGAAGCCAAGCGTACAGGTGCAGCATATGTAATAAGTCATTCTCACGTAAAGGCCAAGTGGAACTCATCATTCATAAAAAGGTTTGCCATCAACCTTTACTCTTTTCTACGTAAGAATTGTCGCGCCCCGGCTGTAAGCTGGAACATTCCTCACATTTATCTGATCAAGGTAGGCATGAACTATCATGTCTAA	2751	0.4166	MGRILSASVFKLKSRRDRQHPCAEHAAAGANRGKEGSNITNQKKEKIEKPNKCYNSDDLDRERGVAAMVECRYQRKAVLFLALQSLGFLLGNLSISPLYVYQSIFSGRLQNIQNEDAVFGAFSLIFWTLSLMSFFKYIIMVLDADDNGEGGIIALYSLLCRNAKFCLLPNHQASDEELYTYHKPGCTNRDIPSSPLKRLIERHKITKPALLILVLLGACMVVCVGALTPAISGKETFITSSVLASIKGLEIQAKVFNLDTFPLLTLIHQAHYVMLVLQLTARNNHDLLFKFPVVTYGVEPVFSLAAPIADNCQLQLQGEGVSILLLISCVLLVGLFVLQHRGAHNVAFMFPPIVILWLLFNFMIGIYNVIKWNPRVYQALSPYYIYRFFQVTGKDGWANLGGVFLCVTGTEAMFADLGYYGQAPIRVAFCCIIYPCLVLQYMGQAAFLSKNFSAVRISFYASIPDVLFWPVFVVTVLTAIVASQAVISAAFSIVKQCHAFHCFPRVKFVHSRRWIQGQTYIPEINWILMIISLAVTIGFGDPIRIGYAYGIACLIVTYVTTWLTSLVINLVWHLSIVAALAFLLFFGSIEVLFLSSYCMKIPKGGWVPLVLSAVFLVVMFVWHYGSRKKYLFDMHNKVSMKWILTLGPSLGIVRVPGMGLIYTELAAGIPATFTHFLTNLPAFYQVVVFVCVKTVPVPHVPHKERYLIGRIGPKSYRMYRCIVRNGYKDVYNNEADFENDLVLSIAEFIQLEAEGGSRNLEGSVDGRMAVVKTSGKFGKRLLMSESAITEGGSSLSLPGTLTVSSSKSPTLKRLQAMYEQESPELHNRKRIRFELLNTIYIDPRVKEELLELVEAKRTGAAYVISHSHVKAKWNSSFIKRFAINLYSFLRKNCRAPAVSWNIPHIYLIKVGMNYHV	916

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele51g0719	916	TIGRFAM	kup: potassium uptake protein	324	916	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele51g0719	916	MobiDBLite	consensus disorder prediction	24	44	-	-
	Lele51g0719	916	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	74	915	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele51g0719	916	Pfam	K+ potassium transporter	82	266	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele51g0719	916	Pfam	K+ potassium transporter	322	729	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele51g0719	Lele-ChrLele51	4344946	4351999	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele51g0719	68	916	Inorganic Solute Cotransporters	AT4G23640	55.112	0.0	906