Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0704 ATGGATAAACTTGCGTGCTTGATGGACTGGGATTTGCAAGCTATTGTAAGAGGGTTCACAGGCGAAGCCCCAGAAACAACAACAACCACGATCATAGATTTCACACATCCTGATTTACCCAATTTCTGTTCTGAATTTCAAGTTCATCCCGATGATCCTTTCTGCAGTACTTTTCCAGAATTCTCAGAAACCACGATGGTGCTTGATGAATTGACAGAGCTTTACAAGCCTTTCTCAACTCAAACAATCACCACGACTTCCGTCGTACCCATCCCTAAAGAAGTCAAAGCATCCTCAGAGGAAGTACAAGATTTGCATGAATCTCCAAGCAAAAGAAGAAAGAAGGACCAGAACAAGAGAATAGTGAAGCAGGTGAGAGACGACGGACTATGCGACGCATGGGCATGGCGTAAATACGGTCAGAAACCGATCAAGGGATCGCCATATCCAAGAAGCTATTACAGATGTAGCAGCTCCAAAGGATGCATGGCGAGGAAACAAGTGGAAAGGAGCCATTTGGATCCTCAAGTTTTCATAGTTACTTATACCGCAGAACACAGTGATCATCACCCACCTCGATCCTCTCGCAAAACTAGGCACTCTAATATTATTCCACAACCTGAAACTAGTCAACAAACTTCTTCTGATCCTTTGGAAGACTCCATTATTGAAGATGAGCCAGTTGTGTCCACTGGGTCAAGCCAGTGCCTGAACAAAGATGCTGAAATTGGTGAGCTTGTCACAAATGATGATGATTGGTTTCCAAGTGTAGATGAACTTGACGGACTTAGCCAAGAATTCGCATTAGATGGTTACGACCTTCATGGCCAATTCTTAGACGTAGTTAGAAGATAG 855 0.4363 MDKLACLMDWDLQAIVRGFTGEAPETTTTTIIDFTHPDLPNFCSEFQVHPDDPFCSTFPEFSETTMVLDELTELYKPFSTQTITTTSVVPIPKEVKASSEEVQDLHESPSKRRKKDQNKRIVKQVRDDGLCDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCMARKQVERSHLDPQVFIVTYTAEHSDHHPPRSSRKTRHSNIIPQPETSQQTSSDPLEDSIIEDEPVVSTGSSQCLNKDAEIGELVTNDDDWFPSVDELDGLSQEFALDGYDLHGQFLDVVRR 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0704 284 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 85 216 IPR044810 GO:0003700
Lele51g0704 284 ProSiteProfiles WRKY domain profile. 125 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele51g0704 284 FunFam WRKY transcription factor 22 114 184 - -
Lele51g0704 284 MobiDBLite consensus disorder prediction 183 218 - -
Lele51g0704 284 MobiDBLite consensus disorder prediction 98 121 - -
Lele51g0704 284 Pfam WRKY DNA -binding domain 132 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele51g0704 284 MobiDBLite consensus disorder prediction 198 218 - -
Lele51g0704 284 SMART WRKY_cls 130 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele51g0704 284 SUPERFAMILY WRKY DNA-binding domain 128 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele51g0704 284 Gene3D WRKY domain 114 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0704 Lele-ChrLele51 4241144 4242100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0704 1 213 WRKY Transcription Factor Family AT4G23550 43.460 5.82e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele51g0704 WRKY 8.2e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0685 49 4149642 4150598 Lele51g0704 51 4241144 4242100 hybridization
Lele50g0718 50 4407681 4409293 Lele51g0704 51 4241144 4242100 hybridization