Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0692 ATGATTATTCCTGAGAAGAACCGTCGTGAGATCTGCAAATACCTCTTCAAAGAGGGAGTTTGCTATGCAAAGAAGGACTTCAATATGCCTAAGCACCCCGATATTGATGTGCCGAATCTACAAGTTATTAAGCTGATGCAGAGCTTTAAGTCCAAGGAGTACGTGCGTGAGACATTTGCGTGGATGCACTACTACTGGTACCTCACTAACGATGGCATTGAGTTCCTTAGAACTTACCTCAATCTTCCTTCCGAAATCGTGCCTGCTACTCTGAAGAAACAAGCTAAGCCAGCTGGCAGACCATTTGGTGGTCCACCTGGTGACCGTCCAAGGGGTCCACCTCGCTTTGAGGGAGAACGTAGGTTTGGTGACCGTGATGGATACCGGGGAGGTCCCCGAGGACCCGGTGGTGACTTTGGAGACAAGGGTGGAGCTCCTGCTGACTACAGACCTTCATTCGGGGGTTCTGGAGGAAGGCCTGGATTTGGTCGTGGTGCTGGTGGTTTTGGAGCACCAACAAGCTCAAATCTATCTTAA 537 0.4991 MIIPEKNRREICKYLFKEGVCYAKKDFNMPKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGSGGRPGFGRGAGGFGAPTSSNLS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0692 178 Gene3D - 1 104 IPR036388 -
Lele51g0692 178 MobiDBLite consensus disorder prediction 112 128 - -
Lele51g0692 178 FunFam 40S ribosomal protein S10 1 104 - -
Lele51g0692 178 MobiDBLite consensus disorder prediction 91 178 - -
Lele51g0692 178 PANTHER 40S RIBOSOMAL PROTEIN S10 1 172 IPR037447 -
Lele51g0692 178 Pfam Plectin/S10 domain 3 94 IPR005326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0692 Lele-ChrLele51 4185684 4187313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0692 1 177 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 76.404 7.45e-77 226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0674 49 4093788 4101406 Lele51g0692 51 4185684 4187313 hybridization
Lele50g0707 50 4351681 4356715 Lele51g0692 51 4185684 4187313 hybridization