Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0682 ATGGCAGCCACGACAACTACGACAACCGCCACCACTGCTTTTCTCAAGGTCCAAAACCAGCCCTCCAAGCCCGGGCGTCGCAAACCTCGCGAAACCACTATCTCCGCCTCTTCTTCTTCTTCTTCTTCCTCCTCCGCCCCCAACGACGCCGTTTCCTCTTCCTCTCGCACGCTTGATCCTCCCTCTGTTGCCTCCCCCAACAAGACTTGGTGCTGCCCTGCTTCTAAACCCATCCCCACTCACTCCGACCAGCCTTGCCGCCTTATTAATTCTCCTGAGAGTTCCTCATTCAACCGTTATACATTGCCCCCCTCGCCTTCGGATTCACCCTCCACCTACAGGATTCGGTTATCGCCTGGTAGGTTTTCTCCGACCATGGATTTTAGCTACTCGGGGAGCCCCGCCAATGGGCACTCTTCTCAGGATTCGTTCCCTTCTAGCTTTACCAAATTCAACTCCGCCCTCACCGCCGGTTTGTTGAATCCAATGTCGCCGCCTCCCCCTTCCGATAAAGCTCGATCGAGCCCCACCCTTTTTGAAATGATGGCTAGCGAGCCCGATGTCCATCCCAGAACTCATATCCCCTCAAACAATATTCCTTCCTCCGCGCACAAGCCCCAAATTCTGGTACAGGATAGGCAGGCTCTAATGATGCAGCGAATATCGGACACACTGGCCACCCGCAGCCCTGGTAACCAGTTCAACGATCCGTCCTCCTGTGATATTAAGCTCACACTCAGTTCCAAAGATGGAATCAGCGTTTCCATGAACGTTCACCGGCAAATTCTTGTTGCCCATAGCAGATTCTTCTCCGTCAAGCTCTCTGATCGCTGGGCGAAGCAGCAGCGGCAGACGCTGCCGTATATTGTTGAAATCGCTGACTGCGATGACGTTGAAATTTACATTGAGACGTTGAGGTTGATGTACTGTAAGGATCTTAGGAAGAAGCTAATGAAGGAGGATGTTTCCAGAGTTCTTGGTTTCTTGAAGGTTTCAGCGGCCATTGGGTTTGATGCTGGGGTTCTATCTTGTTTGGAATATTTGGAAGCAGCTCCGTGGGCAGAGGACGAAGAAGAGAAAGTGGCCTCACTTCTATCCGAGCTTCGTCTTGAAGCTGCTGGCGAAGTTTTGAAGAGGGTTTCAACAGAAGTTAATAATGGAAATGAAGAGGGAAATGATAATGAGGAAGTTCTGCTAAAACTCATTCGTGTGGTACTTGAAGGAAAAGATGAGAAGGCCAGGCGTGAAATGAAAGGGTTAGTGTCAAAGATGCTTCGTGAGAATTCATCTCAAAGTGATCTTCGCAAAGAGTCCTTATACTCGGCTTGTGATGATTGTCTGCAACTTCTCAGTCACCATTTTTTGCGAGCTGCAGCTTCTGACTTGGAAGATGTGTGTCAAATTGCACGACAAGCAGATAATTTGCACTGGATTTTGGATATTTTAATTGATAGACAGATTGCTGAGGATTTCCTGAAAACGTGGGCATCTCAATCTGAATTATCAGAAGCTCATTCTAAAGTGCCTGCAGTTCATAGGTTTGAGGTTAGCAGGGTTACAGCACGATTGTTTGTTGGGATTGGGAAGGGACAATTATTAGCTTCTAAAGATGTCAGGTGTTTACTACTAAAAACATGGTTGGTGCCATTCTATGATGATTTTGGTTGGATGAGGCGGGCATCCAAAGGCCTTGATCGTCATCTAATTGAGGATGGCCTTAGCAACACAATCCTCACTCTGCCACTCTCCTGGCAACAGGAAATCCTGCTTGCTTGGTTTAACCGTTTCTTGAATTCTGGGGAAGACTGCCCAAATATACAAAGAGGTTTCGAAATTTGGTGGAGACGGGCTTTTTGGAAGCGAAATGGAGAGCAAGAGCTGACACAGCATTTACGAATTACAACTGCCATAATAGATAACCCTTGA 1926 0.4798 MAATTTTTTATTAFLKVQNQPSKPGRRKPRETTISASSSSSSSSSAPNDAVSSSSRTLDPPSVASPNKTWCCPASKPIPTHSDQPCRLINSPESSSFNRYTLPPSPSDSPSTYRIRLSPGRFSPTMDFSYSGSPANGHSSQDSFPSSFTKFNSALTAGLLNPMSPPPPSDKARSSPTLFEMMASEPDVHPRTHIPSNNIPSSAHKPQILVQDRQALMMQRISDTLATRSPGNQFNDPSSCDIKLTLSSKDGISVSMNVHRQILVAHSRFFSVKLSDRWAKQQRQTLPYIVEIADCDDVEIYIETLRLMYCKDLRKKLMKEDVSRVLGFLKVSAAIGFDAGVLSCLEYLEAAPWAEDEEEKVASLLSELRLEAAGEVLKRVSTEVNNGNEEGNDNEEVLLKLIRVVLEGKDEKARREMKGLVSKMLRENSSQSDLRKESLYSACDDCLQLLSHHFLRAAASDLEDVCQIARQADNLHWILDILIDRQIAEDFLKTWASQSELSEAHSKVPAVHRFEVSRVTARLFVGIGKGQLLASKDVRCLLLKTWLVPFYDDFGWMRRASKGLDRHLIEDGLSNTILTLPLSWQQEILLAWFNRFLNSGEDCPNIQRGFEIWWRRAFWKRNGEQELTQHLRITTAIIDNP 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0682 641 MobiDBLite consensus disorder prediction 1 19 - -
Lele51g0682 641 Pfam BTB/POZ domain 233 325 IPR000210 GO:0005515
Lele51g0682 641 MobiDBLite consensus disorder prediction 84 114 - -
Lele51g0682 641 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 220 625 IPR038920 -
Lele51g0682 641 MobiDBLite consensus disorder prediction 31 64 - -
Lele51g0682 641 SUPERFAMILY POZ domain 229 348 IPR011333 -
Lele51g0682 641 MobiDBLite consensus disorder prediction 1 114 - -
Lele51g0682 641 Gene3D Potassium Channel Kv1.1; Chain A 213 351 IPR011333 -
Lele51g0682 641 ProSiteProfiles BTB domain profile. 240 317 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0682 Lele-ChrLele51 4144918 4147175 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele51g0682 BTB 0.00015 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0682 51 4144918 4147175 Lele51g0682 51 4144918 4147175 ECH
Lele49g0665 49 4049842 4052096 Lele51g0682 51 4144918 4147175 hybridization
Lele50g0695 50 4301158 4303404 Lele51g0682 51 4144918 4147175 hybridization