Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0681 ATGCTCATCCGCGAAATCCTGCCGCTGGCCAAGTTCTCCGACCTAGTGGACCCTCCGGAAAGCTGTGCCGTGTGTCTCTACGAGTTCGAGGCCGACGACGAGATCAGGCGGCTGACCAACTGTAGGCACATATATCACCGAGGATGTCTGGACCGTTGGATGGGTTACGATCAGAGAACGTGTCCCTTATGTCGAACACCTTTCATACCTCACGATATGCAAGCTGCGTTCAATGATAGACTCTGGGCTGCTTCTGGCATTCCTGAATTCTACTCTGATTCTGAAGAATATCCCTATCTTTCTTCTTTTTAG 312 0.5064 MLIREILPLAKFSDLVDPPESCAVCLYEFEADDEIRRLTNCRHIYHRGCLDRWMGYDQRTCPLCRTPFIPHDMQAAFNDRLWAASGIPEFYSDSEEYPYLSSF 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0681 103 PANTHER RING ZINC FINGER PROTEIN-RELATED 10 85 - -
Lele51g0681 103 ProSiteProfiles Zinc finger RING-type profile. 22 65 IPR001841 -
Lele51g0681 103 SUPERFAMILY RING/U-box 5 71 - -
Lele51g0681 103 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 16 69 IPR013083 -
Lele51g0681 103 CDD RING-H2 22 65 - -
Lele51g0681 103 SMART ring_2 22 64 IPR001841 -
Lele51g0681 103 Pfam Ring finger domain 21 65 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0681 Lele-ChrLele51 4137615 4137926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0681 1 86 C3H Transcription Factor Family AT1G63840 67.045 2.43e-38 124