Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0679 ATGTCTTCAAATGCCTACGCTTTTGATTCTTCTTTTCTCAGACATTCGAGCTCTGCAAACATGGCCGCCGCCTCTGATGCAACAGGCGGAGACCTTTTCTTCTCTGACCCTTTTCCTGTCCCTTTATTCAACCCCACCAACGACGTCTTTCATCAGATTCCAGACAACCAAACATCGTACCAACAAACACTCGACGAAACTGCTTCTTCTTCTCTTGACCCGTTTTCATCTTCTTTCTTTTCCTTTTCTCCTCCAAGTACCCACCTGGAAAATCTGAGCCTTTATCAGAATCTGTCAACTGGGACAAATTTAGGAACTGAGTTTGGCGGAAATTTCTCTGCTTTAGATGGGTTCAAAGTGAAGAGTGAAGAATTACAAATGGGTGCTGATAATTACAACGGCAACAATCAGAACTACGTTCCTCATCACAGTTACAATGGTCCTGAAAATGTACACAAGTCCATTCGAAGGAGTTACAGCAGTAACTGTTTTGATGGGAAACCTGGTTTTCTCTTTCAACCCCACTATGATACTCTCATAGATTCCTCAAACTTTCAGGGCCAGACCATGAATTCTCCAGAAAACAATCAAGTAAGAAGAGTCTGCAGTACAGGAGACTTGCAGAACATGGACTCAACTCAAACGAAGGAAGGCTCGTTCTTAGAGGAAGCAAACTTCAAAGTAGGCCGTTACAGTGCTGAAGAAAGAAAAGAGAAAATCTCCAAGTACAGAGCCAAACGAAGACAGAGGAACTTCAACAAAACGATAAAGTATGCATGCCGGAAGACACTGGCGGACAATCGGCCACGCATACGTGGCAGATTCGCACGCAACGACGAGACCGGCAAGAATTTCAAGGGTTCATGTTCAACCAGAAACGAAGAAGACGACGAGTTCTGGTTTGAAGGGTTGCATGAAGAACAAGATCAGACGATGACGTTGAGAATGAGAGGAACACAATACTTTAACAGTTATGGAGATCCCCTTCAGTTCCAATATCATAGCTTGAGATTTACATGA 1020 0.4353 MSSNAYAFDSSFLRHSSSANMAAASDATGGDLFFSDPFPVPLFNPTNDVFHQIPDNQTSYQQTLDETASSSLDPFSSSFFSFSPPSTHLENLSLYQNLSTGTNLGTEFGGNFSALDGFKVKSEELQMGADNYNGNNQNYVPHHSYNGPENVHKSIRRSYSSNCFDGKPGFLFQPHYDTLIDSSNFQGQTMNSPENNQVRRVCSTGDLQNMDSTQTKEGSFLEEANFKVGRYSAEERKEKISKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRFARNDETGKNFKGSCSTRNEEDDEFWFEGLHEEQDQTMTLRMRGTQYFNSYGDPLQFQYHSLRFT 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0679 339 ProSiteProfiles CCT domain profile. 236 278 IPR010402 GO:0005515
Lele51g0679 339 Pfam CCT motif 236 278 IPR010402 GO:0005515
Lele51g0679 339 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 64 294 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0679 Lele-ChrLele51 4129102 4130451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0679 232 281 C2C2-CO-like Transcription Factor Family AT5G57660 52.000 5.47e-11 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele51g0679 CCT 1.5e-17 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0662 49 4034206 4035520 Lele51g0679 51 4129102 4130451 hybridization
Lele50g0692 50 4286595 4287192 Lele51g0679 51 4129102 4130451 hybridization