Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0663 ATGGTACCGGAGAATCTGAAGAAACAACTCGCCTTGGCTGTGAGAAGCATCCAATGGAGCTACGCAATCTACTGGACTGGTTCACCTGACAACCCCGGGGCGTTCCAGTGGGGTGAAGGGTACTACAATGGGGACATAAAGACGAGGAAAACAAGCCAAGCAGTGGAACTTAATTCTGACCAAATAGGTTTAAGGAGGAGTGAGCAGCTCAGAGATCTATTTGAGTCCCTTGCAACTGCAGAATCAAGTCCACAAGCTAAAAGGCCTTCAGCGGCATTATCTCCTGAGGATCTCACTGATACAGAATGGTTTTATTTGGTGTGCATGTCATTCGTATTCAATATTGGCCAAGGATTGCCTGGAAGAACTCTGGCAAAAGGCCAACCCATTTGGCTGCACAATGCCCATTTGGCTGATAGTAGAATTTTTAGTCGCTCTCTTCTGGCAAAGAGTGCATCCATTCAGACAGTGGTATGCTTTCCTTTTCTGGATGGTGTTCTTGAGTTAGGTACAATCGATGTGGTCTCGGAGGACCTCAGTCTCATTCAACGCATGAGAACTTCTTACTTGGATATTGCTGGCGCAGTATTTGATCATAATGCTGAATCAGAATATGAAGTAGCCAATGCAATTTCTCCCAATAATAGTTCAAATGAGTTTCAAGCCAATAAACAAGCAGATGAGAGATTCATGGCTGAAAAAATAAATGGTGTTGCTTCTCACCATGTCGAAAACTGGCAAGTGATGGAGGATGAGTTGAGTAATTGTGCCCATACTTCCATGAATACTAGTGACTATATATCTCAAACTTTTGCTGGTTCTGAAAAGACTAATGCTTCTGTTCCCAAGGGCGATCATCGTGGGCAAGATCTTCAAGAGGGCAACAAAAACACGAAAATGACCGTGGTGGATGTTCATTGTGATGATTGGCATTATCAAAAAGTTCTTTCTTCTCTTCTTAAAATCTCAGACCAATTAATTATGGGAGCACATTTTCAAAACTTACATTGTGAATCCAGCTTTGTCAGTTGGAAGAAAGAAGGACCAACGGGTGGTTGTCAATGGCCAAGAGGAGGGACTTGCCAAAAATTATTGAAGAAGGTATTGTTTGAAGTTCCTCGTATGCACACGGATTGGTTGCTTGAGTGTCAAGAAGAAAATGATTATAAAGAGGGAATGAGACCTGAAGCTGCTGATGAAATAGGCTTTAACCATGTACTGTCTGAAAGAAAGAGAAGAGCAAAACTAAATGAAAGGTTTTTAACCCTTAAATCAATGGTTCCTTTGATTACTAGGGATGACAAAGTTTCAATACTAGATGAGGCAATAGAATACCTTAAAAAGCTGGATAAAAGGGTGAGAGACTTAGAAGCTCGCCGTGAAACCAAAGATTCAAAGACAAGAACTAAAAGAACACGTCAAGATGTTGTAGAAAGGACTTGTGATAATTATTGTAACAACAGATCTGATAATGGCAAGAAACCAGCAATGAACAAAAGGAAGGCTTGTGAAATTGACGAGACAGAGACAGAGACAGAGATTGATTCAGTTCGTCTAAAAGATATTTCTAATAATGTTACTATCTGTATGAATGACAATGAGGTTTTGATTGAATTGAAGTGTCCTTGGAGAGAAGGTGTTCTACTAGAAATAATGGAAGCAGTCAGCAATCTTCATTTAGATTTTCATTCAGTTCATTCATCGGAAGCTGATGGGACTCTCTATTTAACCATGAAATCCAAGATCAGCGGAGCAGCTTTTACCTCAACAAAAAAGATCAAACAAGCACTGCTCAAGGCAGCTTGGAAGTGTTGA 1815 0.4061 MVPENLKKQLALAVRSIQWSYAIYWTGSPDNPGAFQWGEGYYNGDIKTRKTSQAVELNSDQIGLRRSEQLRDLFESLATAESSPQAKRPSAALSPEDLTDTEWFYLVCMSFVFNIGQGLPGRTLAKGQPIWLHNAHLADSRIFSRSLLAKSASIQTVVCFPFLDGVLELGTIDVVSEDLSLIQRMRTSYLDIAGAVFDHNAESEYEVANAISPNNSSNEFQANKQADERFMAEKINGVASHHVENWQVMEDELSNCAHTSMNTSDYISQTFAGSEKTNASVPKGDHRGQDLQEGNKNTKMTVVDVHCDDWHYQKVLSSLLKISDQLIMGAHFQNLHCESSFVSWKKEGPTGGCQWPRGGTCQKLLKKVLFEVPRMHTDWLLECQEENDYKEGMRPEAADEIGFNHVLSERKRRAKLNERFLTLKSMVPLITRDDKVSILDEAIEYLKKLDKRVRDLEARRETKDSKTRTKRTRQDVVERTCDNYCNNRSDNGKKPAMNKRKACEIDETETETEIDSVRLKDISNNVTICMNDNEVLIELKCPWREGVLLEIMEAVSNLHLDFHSVHSSEADGTLYLTMKSKISGAAFTSTKKIKQALLKAAWKC 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0663 604 PANTHER TRANSCRIPTION FACTOR TT8 2 599 - -
Lele51g0663 604 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 400 449 IPR011598 GO:0046983
Lele51g0663 604 Coils Coil 439 466 - -
Lele51g0663 604 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 188 IPR025610 -
Lele51g0663 604 Pfam Helix-loop-helix DNA-binding domain 405 449 IPR011598 GO:0046983
Lele51g0663 604 Gene3D - 402 463 IPR036638 GO:0046983
Lele51g0663 604 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 403 462 IPR036638 GO:0046983
Lele51g0663 604 SMART finulus 406 455 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0663 Lele-ChrLele51 4010249 4013251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0663 2 604 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 47.158 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele51g0663 bHLH-MYC_N 1.3e-47 CL0161