Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0654 ATGGATGAGAGAGAAGCCATGGCATTTTCTGGAGGTCCCCCTTCATATTACATGCATAGAGGGGGTATTGTTGGGTCTGTAGCTGCAACACATTCCGGAGGGTTTCAAGTGCCTCCTGGGTTTAGACCAAACACCGGCATTCCAGCACAGTCAAATGTACGAGGTAGCTCTATGGGTTCTACAGTTACTGTAGAACCTGCTCATACCAGTTATAGTCATAGTCATGGCATTATCATTAGTTCGTCTCCTGGAGTGCCTCCTTCAAGCGAGCGTGTGAAAAAGAAACGAGGAAGGCCCCGTAAATACCGTCCTGATGGACCCGTTTCTCTGGGTCTGTCTTCCATGTCTGCCACTGCAAATTCTACCCCTGCCTCGAGCACTCCGTCCCAGAAACGTGCTAGAGGGCGCCCACCTGGAAGTGGAAGGAAACAACAACTAGCCTCGCTAGTTGGGTTATTCTATTCAGAAAAGTTGCTTAAAGACATTGTAGCAAAGTTACTGTCCATTTCGCAGCAGAGACCTAGGGCACTTTGCATCTTGTCAGGTACTGGGACAGTTTCATCAGTTACTCTGCGGCAGCCTGCTTCTACTGTTGTCAGCATCACTCTTGAGGGCCGATTCCAAATATTACGCTTGTCTGGTTCTTACCTGGTTGCCGAAGATGGTGGACACCGCGATAGAACAGGTGGTGTGAGTGTTTCGCTTGCTAGTCCTGATAGTCATGTTATTGGTGGTGCGGTTGCTGTGCTTATTGCTGCAAGCCAAGTGCAGGTGGTAGTGTGCAGTTTTCTACATGAAGGGTCCAAGACCAAGACTAAGCAAGAGAGTGCCCCGCAGGGTGATGTTTCTGAAGCTGAGCATGATAACAAGTTAGCTACTCCGGCGAGTGCTCCGCCAACTCAAAACTACAGTCAACCACCAGCAAGAGGCATTTGGCCATCCGATCTGAAAAGTACACATACTGGTATTGACTTGATGCATGGATAA 987 0.4894 MDEREAMAFSGGPPSYYMHRGGIVGSVAATHSGGFQVPPGFRPNTGIPAQSNVRGSSMGSTVTVEPAHTSYSHSHGIIISSSPGVPPSSERVKKKRGRPRKYRPDGPVSLGLSSMSATANSTPASSTPSQKRARGRPPGSGRKQQLASLVGLFYSEKLLKDIVAKLLSISQQRPRALCILSGTGTVSSVTLRQPASTVVSITLEGRFQILRLSGSYLVAEDGGHRDRTGGVSVSLASPDSHVIGGAVAVLIAASQVQVVVCSFLHEGSKTKTKQESAPQGDVSEAEHDNKLATPASAPPTQNYSQPPARGIWPSDLKSTHTGIDLMHG 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0654 328 MobiDBLite consensus disorder prediction 74 143 - -
Lele51g0654 328 MobiDBLite consensus disorder prediction 294 308 - -
Lele51g0654 328 MobiDBLite consensus disorder prediction 45 61 - -
Lele51g0654 328 SUPERFAMILY AF0104/ALDC/Ptd012-like 161 269 - -
Lele51g0654 328 CDD DUF296 161 263 IPR005175 -
Lele51g0654 328 MobiDBLite consensus disorder prediction 41 61 - -
Lele51g0654 328 MobiDBLite consensus disorder prediction 111 133 - -
Lele51g0654 328 Gene3D - 160 284 - -
Lele51g0654 328 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 66 299 IPR039605 GO:0003680
Lele51g0654 328 ProSiteProfiles PPC domain profile profile. 146 288 IPR005175 -
Lele51g0654 328 Pfam Plants and Prokaryotes Conserved (PCC) domain 161 263 IPR005175 -
Lele51g0654 328 MobiDBLite consensus disorder prediction 269 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0654 Lele-ChrLele51 3944475 3947629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0654 1 313 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 45.278 1.93e-73 229