Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0648 ATGAAGTTATGCGCTTCACTGTTGTTTCTCAGTCTAATTTCCATGGTCTCTTTTGCGACTTGTGATACTGTGCCCTCAAATGAAGTTTGGGCGCTCACAGCCTTTAAAGAGGCTGTATATGAAGACCCTTACCTAGTTCTGTCTAACTGGAATACGCTGGATTTAGATCCTTGTGAATGGTTTGGCGTTTCTTGCACTAAAGATCGGGATCATATCATTAAGCTAAATATTTCGGGGTCATCATTTAGAGGATTTCTGGCGCCTGAATTGGGACAAATCACCTACTTTCAAGAACTGATTTTGCATGACAACAATCTGATTGGAACAATACCTAAAGAATTGTTTGAGTTGAATTCCCTCAAGGTCTTGGATTTGGGGAAGAATCAGTTATCTGGACCAATTCCTCCAGAGATTGGAAATCTAGCTGAAGTTGTTAAAATAAACCTGCAGTCCAATGGGTTGACTGGTAGGCTACCTCAATCAATTGGAAATTTGAAATACCTTCAAGAACTTAGGCTGGACAGGAATAAACTTCAAGGACCAGTTCCTGCTGGTAGCAGTTCAAACTTTTCCCCGAATACGCGTGGAATGTATGCCTCAAATGCAAATTTAACTGGTCTCTGTCGATCACCTCAGTTGAAAGTTGCAGATTTTTCATATAACTTCTTCGTAGGTAGCATACCCGCTTGCTTGGAGTATCTACCTAGGTCTAGCTTTCAAGGGAACTGCTTCCAAAGCAATGAATTAAAGCAGCGTTCTTCATTGCAATGTGCTGGTGCTTCCCCTGCCAAGAGCCATTCTGTGGCCAATCCAAAGCATTCTACTGAATATGTGGCCAAGCGTCATAAAGCGTCCCAACCTGTCTGGCTTTTGGCTCTAGAAATAGCGACGGGAACTTTGGTTGGTTCTATCTTTCTGGTTGCAGTTCTCGCTGCTTTTCTTAAATGTGACAACAAAGCATCTATCATTTGGCCTTGGAAGAAATATGCAAGCCGGAAGGAGCATATGGCAGCAGTATATATAGACTCTGGGATGCTGAAGGGTGTGAGGAGTTTCAGCAGACAAGAGCTTGAAGTGGCATGTGAAGACTTCAGCAACATTATTGGGTCCTCACCAGATAGTGTAGTCTACAAAGGCACCATGAAAGGTGGGCCTGAGATTGCTGTAATTTCTCTCTGCATGAAGGAGGAGCATTGGACAGGATACCTCGAGCTCTATTTTCAGAGAGGGGTGGCAGACTTGACAAGACTAAATCATGAGAACACTGGAAAACTTCTGGGATATTGTAGAGCGATCTCTCCATTTACAAGGATGCTGATTTTTGAGTATGCTTCAAATGGAACACTCCATGAGCACTTACATTATGGAGAAGGGAGCCAGTTGTCATGGACACGGCGTATGAGAATCATCATTGGAATTGCACGTGGACTGAAGTATCTACACACAGAAGTTGACCCTCCATTCACTATATCGGAGCTGAATTCTAGTGCTGTATACCTTACAGAAGATTTTTCCCCTACGCTGGTTGATTTTGAGAGTTGGAAGACAATACTTGAAAGGTCAGAAAAGAATTCTGAATCTGTTGGAAGCCAAGGTGCTGTTTGTGTTCTTCCACGTACTCTCGAGGCACGCCATCACGATCCCCAGGGAAATGTATATGCTTTTGGCATACTTCTGCTGGAGATAATAAGTGGGAGACCTCCATATTGCAAGAATAAAGGCTCCTTGGTAGATTGGGCCAAAGAGTATCTAGAAATGCCAGAAGTAATGTCATATGTGGTGGATCCGGAGTTGAAACATTTCAGATACGAGGACCTCGCAGTAATATGCGAGGTAGTAAATCTCTGTATCCATCCGGACCCGACCAAGCGTCCATCGATGACAGAAATATGCAGTATGCTGGAAAGCAGGATTGACACATCGATGAGCGTGGATTTCAAGTCTTCATCTTTGGCTTGGGCTGAACTTGCACTTTCTTCATAG 1983 0.4347 MKLCASLLFLSLISMVSFATCDTVPSNEVWALTAFKEAVYEDPYLVLSNWNTLDLDPCEWFGVSCTKDRDHIIKLNISGSSFRGFLAPELGQITYFQELILHDNNLIGTIPKELFELNSLKVLDLGKNQLSGPIPPEIGNLAEVVKINLQSNGLTGRLPQSIGNLKYLQELRLDRNKLQGPVPAGSSSNFSPNTRGMYASNANLTGLCRSPQLKVADFSYNFFVGSIPACLEYLPRSSFQGNCFQSNELKQRSSLQCAGASPAKSHSVANPKHSTEYVAKRHKASQPVWLLALEIATGTLVGSIFLVAVLAAFLKCDNKASIIWPWKKYASRKEHMAAVYIDSGMLKGVRSFSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCMKEEHWTGYLELYFQRGVADLTRLNHENTGKLLGYCRAISPFTRMLIFEYASNGTLHEHLHYGEGSQLSWTRRMRIIIGIARGLKYLHTEVDPPFTISELNSSAVYLTEDFSPTLVDFESWKTILERSEKNSESVGSQGAVCVLPRTLEARHHDPQGNVYAFGILLLEIISGRPPYCKNKGSLVDWAKEYLEMPEVMSYVVDPELKHFRYEDLAVICEVVNLCIHPDPTKRPSMTEICSMLESRIDTSMSVDFKSSSLAWAELALSS 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0648 660 Gene3D Phosphorylase Kinase; domain 1 337 443 - -
Lele51g0648 660 Pfam Protein tyrosine and serine/threonine kinase 366 634 IPR001245 GO:0004672|GO:0006468
Lele51g0648 660 ProSiteProfiles Protein kinase domain profile. 362 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g0648 660 SUPERFAMILY Protein kinase-like (PK-like) 345 635 IPR011009 -
Lele51g0648 660 Pfam Leucine rich repeat 97 154 IPR001611 GO:0005515
Lele51g0648 660 Gene3D Ribonuclease Inhibitor 141 270 IPR032675 -
Lele51g0648 660 FunFam Inactive receptor-like serine/threonine-protein kinase 336 443 - -
Lele51g0648 660 Gene3D Ribonuclease Inhibitor 27 140 IPR032675 -
Lele51g0648 660 SUPERFAMILY L domain-like 26 235 - -
Lele51g0648 660 PANTHER PROTEIN MALE DISCOVERER 2 15 658 - -
Lele51g0648 660 FunFam Leucine-rich repeat receptor-like protein kinase 25 184 - -
Lele51g0648 660 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Lele51g0648 660 Gene3D Transferase(Phosphotransferase) domain 1 444 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0648 Lele-ChrLele51 3918484 3922043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0648 41 639 Receptor kinase-like Gene Family AT5G45780 28.293 3.22e-58 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lele51g0648 PK_Tyr_Ser-Thr 7e-19 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0628 49 3811977 3815517 Lele51g0648 51 3918484 3922043 hybridization
Lele50g0657 50 4030851 4034514 Lele51g0648 51 3918484 3922043 hybridization