Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0637 ATGGCGCCATTGCCGGTGGAGCAGAACGGTGAATCAGCAACGACTGATTCTCAGAGATCTATTCCGACGCCGTTTCTGACGAAAACCTACCAGCTTGTGGAGGACCCCTCTGTGGATGATCTGATTTCCTGGAATGAAGATGGAACGAGTTTCATAGTTTGGCGGCCTGCTGAATTCGCTCGAGATTTGCTTCCAATGTATTTCAAACACAATAACTTTTCAAGTTTCGTCCGCCAACTAAACACCTATGGATTTCGGAAGGTTGTCCCCGATCGTTGGGAATTCGCTAATGACTGTTTCCGGCGAGGCGAGAGAAGCCTGCTTCGAGACATTCAGCGGCGGAAAATATCGACGACGTCTACGGCTGGCGTAGCTGCTGCCAATACAGTGACTGTGGCTGCAGTACCTGCCACCGCTATAGGGGTGTCTCCGACCAACTCCGGTGAGGAACAGGTAATCTCTTCAAACACATCTCCGATTGCCGCAAATAACACAGTGCAGCGCACTACGAGCTGCACCACTGCACCCGAGCTCTTAGAAGAGAATAACAAGCTTAGGAAAGAGAACATGCAATTGAGTAATGAATTGAGTCAATTGAAGGGGCTCTGTAACAACATACTGACATTGATGACGAATTATGCTTCAAGCCAATTAGAATCCAGTAGTGCTGCCGAAGGAAAACCATTGGAGCTTTTACCTACGACGCAGCTTTCGGCCGAGGAAGCCATCGTAGGAGGCGGCGGCGCTTCGCAAGAGACGAAAGTTGCAGAAGCGGAGGTGCCGAAATTGTTCGGGGTTTCAATTGGGGCAAAACGACGTCGCAGTTCAGAGGGTGAGGAGGCAGAAAAAGAAGAACAATATCAAACACAGTCGTCCCAAGAACCCGACGGTGGCTCCGATGTGAAAACAGAGCCGCTAGATGGTAGTAACTCCGATGATCCGGAGACACCCTGGTTGGAGCTTGGGAAACAATAG 975 0.5015 MAPLPVEQNGESATTDSQRSIPTPFLTKTYQLVEDPSVDDLISWNEDGTSFIVWRPAEFARDLLPMYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRGERSLLRDIQRRKISTTSTAGVAAANTVTVAAVPATAIGVSPTNSGEEQVISSNTSPIAANNTVQRTTSCTTAPELLEENNKLRKENMQLSNELSQLKGLCNNILTLMTNYASSQLESSSAAEGKPLELLPTTQLSAEEAIVGGGGASQETKVAEAEVPKLFGVSIGAKRRRSSEGEEAEKEEQYQTQSSQEPDGGSDVKTEPLDGSNSDDPETPWLELGKQ 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0637 324 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele51g0637 324 MobiDBLite consensus disorder prediction 248 324 - -
Lele51g0637 324 MobiDBLite consensus disorder prediction 272 289 - -
Lele51g0637 324 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele51g0637 324 Gene3D - 17 115 IPR036388 -
Lele51g0637 324 MobiDBLite consensus disorder prediction 1 21 - -
Lele51g0637 324 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 16 293 IPR027725 -
Lele51g0637 324 Coils Coil 175 202 - -
Lele51g0637 324 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Lele51g0637 324 FunFam Heat stress transcription factor B-4 17 115 - -
Lele51g0637 324 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele51g0637 324 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele51g0637 324 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele51g0637 324 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0637 Lele-ChrLele51 3855099 3856186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0637 16 323 HSF AT4G11660 56.269 1.52e-110 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele51g0637 HSF_DNA-bind 2e-32 CL0123