Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0622 ATGAACGCTTTCGGAACTTTCACAAGTAACTCAGAGTCGTCTCACTCCGACGAAGAAGCGATCACATTAGCGTCGGAGAAACCAAAGAAGCGAGCCGGACGAAGGGTGTTTAAGGAGACAAGACATCCTGTGTACCGAGGAGTTCGTCGCCGGGACAACGACAAATGGGTCTGCGAGGTTCGTGTTCCTAATAATAACAAACTAAGGATCTGGCTTGGAACTCATTCGACTCCTGAGAAAGCCGCCAGAGCACATGATGTTGCTGCTCTCGCGCTCCGTGGTAATTCGGCGTGTCTCAATTTCGCAGACTCCGCGTGGCGGCTTCCGGTGCCGGCGTCCACCGATCCCAATGAGATAAGGCGAGTGGCAGTGGAGGCGGTGGAGGCATTTGACGAAGAAGTGTGTAGTAGCAGTATGGTGAAAATGGGATCATCAGAAGAAGCTAATGCTGGTACGAGTGTTGAATTAGAAAGGTATGTGAATGGAGTTTCAGGGTTTGAAGATGATCAGGTTTTGTTTAGCATGGCGGACGAGCCGTTGAGATCACCGCCGGCGGCTTATTCTCTGGGAACACATGGGTGGGACTGGAGGTACGAAGTGGACCAGGTGGATAATGAGGTTTCACTTTGGAGCTTTACCATTTGA 645 0.5101 MNAFGTFTSNSESSHSDEEAITLASEKPKKRAGRRVFKETRHPVYRGVRRRDNDKWVCEVRVPNNNKLRIWLGTHSTPEKAARAHDVAALALRGNSACLNFADSAWRLPVPASTDPNEIRRVAVEAVEAFDEEVCSSSMVKMGSSEEANAGTSVELERYVNGVSGFEDDQVLFSMADEPLRSPPAAYSLGTHGWDWRYEVDQVDNEVSLWSFTI 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0622 214 ProSiteProfiles AP2/ERF domain profile. 44 102 IPR001471 GO:0003700|GO:0006355
Lele51g0622 214 SUPERFAMILY DNA-binding domain 44 104 IPR016177 GO:0003677
Lele51g0622 214 Gene3D AP2/ERF domain 44 103 IPR036955 GO:0003700|GO:0006355
Lele51g0622 214 CDD AP2 45 104 IPR001471 GO:0003700|GO:0006355
Lele51g0622 214 SMART rav1_2 44 108 IPR001471 GO:0003700|GO:0006355
Lele51g0622 214 MobiDBLite consensus disorder prediction 1 18 - -
Lele51g0622 214 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 9 211 IPR045277 GO:0003700
Lele51g0622 214 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Lele51g0622 214 PRINTS Ethylene responsive element binding protein signature 45 56 IPR001471 GO:0003700|GO:0006355
Lele51g0622 214 MobiDBLite consensus disorder prediction 1 31 - -
Lele51g0622 214 Pfam AP2 domain 43 94 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0622 Lele-ChrLele51 3767204 3767848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0622 21 212 AP2-EREBP Transcription Factor Family AT1G63030 54.404 8.81e-63 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele51g0622 AP2 6.4e-13 CL0081