LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele51g0596	ATGAGAAGGCATCTTCAATTTCATCTCCAGCATGCTCTCGCGTGCTCTGTTCTTTGTCTTCTTTCATCTGTCACGGTCTCGCCGGTGACTGAGAAGGAGATTTTGCTTCAATTTAAGGGTAACATTACAGATGATCCTCAGAACAACTTGAGCTCATGGGTTTCGAGTGGAAACCCTTGTGAAGATTATAGGGGAGTCTTCTGTAACTCCGAAGGTTTTGTGGAAAGAATCGTGCTATGGAACACTAGTTTGTCCGGAGTATTGGCGCCGGCTCTGTCGGGGTTGAAATTTCTGAGGATTTTGACACTGTTCGGGAATAGTTTTTCGGGGAAGATTCCGGAAGAATATGGTGACATTCACTCATTGTGGAAGATCAATTTGAGCTCCAATGCATTATCTGGTTCAATACCAGAGTTCATTGGTGACTTAGAAAGTATCCGCTTTCTGGATTTATCCAAGAATGGCTTCACTGGAGAGATTCCTTCGGCTTTGTTTAGGCACTGTTACAAAACCAGGTTCATTTCTCTTTCTCATAACAGTATTTCAGGTATAATTCCGGCGTCATTGGCGAATTGCTCGAACCTCGAAGGTTTGGATTTTTCTTTCAACAATCTAAGAGGGGGGATTCCTTCTGGACTTTGTGATCTTCCAAGGTTATCCTACATGTCCTTGAGAAGCAATGCCTTATCAGGAACAGTGAAACAGCAGATTGTGGGATGCCAAAGTTTGACACTTTTGGATCTCGGAGATAATACATTCACTGGTTCAGCTCCATTTAGCATCATTGAAACGAAGAATCTCACTTATTTCAATGTGTCAAATAACGGTTTTAGTGGACAAATTCCTGAGATCACTACCTGTGAGGGATTACAATTTTTTGATGCTTCAGGGAATGCTTTGGATGGAGAGATTCCTTCTAGTATAACAGCATGCAAGAACCTCAAGCTATTGGCCTTGGAGTCTAATAGGTTGAAAGGGACAATCCCATTAGGGATTAAGGATATGGGAAGTCTCCTAGTTATTAAATTAGGTAATAATTCAGTAAGTGGATCAATTCCCAAGGGGTTTGGCAACATTCAGCTGCTTGAAGTCCTTGATTTGCATAATCTAAACCTTGTCGGTGAAATTCCTAAAGATATAAGCAATTGTAGATTCCTTCTAGAGCTGAATGTTTCTGGTAATGACTTAGAAGGAGAGATTCCTCAGAACCTTAACAACTTAACATATCTGGAAGTCCTTGACCTACATCAGAATCAGCTCAATGGCAGCATCCCAACAAGCGTAGGAAACTTGTCAAAGATCCAATACCTGGATTTGTCACACAATTCACTTTCTGGTTCTATCCCTTTTTCCTTTGGGAATTTGAACAAACTTACACATTTTAATCTCTCATTTAACAACCTCTCTGGTGTCATTCCAACTATTGCTTCGATACAGAGTTTTGGTTCTTCAGCATTTTCCAACAACCCTTATCTTTGCGGTGTTCCTTTGAACACCCCTTGCTCAGCAATTGGCACTACATCACAGTCTACTTCTAGGAAACCTAAACTAAGTGTCTCTGCAATTATTGCAATCGTTGCCGCAGTAGTGATTCTTATTGGGGTTTGTTTGGTGAGCATCATGAACATCAAGGCCCGGAGTAAGAAAAAAGATGAACAGATGATGATTGTTGAGAGCACACCCCCTGGATCCACAGAATCAAATGTTATAATAGGAAAGCTGGTTCTCTTCAGCAAAAGCTTACCATCCAGGTATGAAGACTGGGAGGCAGGTACCAAAGCATTGCTTGATAAAGAGTCTCTGATCGGGCGCGGATCGATTGGGACGGTCTACAGAACTGATTTTGAAGGTGGGATCTCAATTGCAGTGAAAAAGCTTGAGACTTTGGGAAGAATCAGAAACCAGGATGAATTTGAGCATGAGATTGGGCGAATAAGTAACCTTCAACACCCTAATTTAGTTGCCTTTCAAGGTTACTATTGGTCCTCAACAATGCAGTTGATTCTATCAGAGTTTGTCTCAAATGGGAATCTCTACGATAATCTACACGGCTTCGGCTATCCCGGAACCAGCACTAGCCGCGGAAATCGGGAACTGATCTGGTCTAGAAGTACAGAAAGGAGGCGGCAGAAATGGAAGGAAATTCGTGCATACAAGTTTTCCTAG	2166	0.4192	MRRHLQFHLQHALACSVLCLLSSVTVSPVTEKEILLQFKGNITDDPQNNLSSWVSSGNPCEDYRGVFCNSEGFVERIVLWNTSLSGVLAPALSGLKFLRILTLFGNSFSGKIPEEYGDIHSLWKINLSSNALSGSIPEFIGDLESIRFLDLSKNGFTGEIPSALFRHCYKTRFISLSHNSISGIIPASLANCSNLEGLDFSFNNLRGGIPSGLCDLPRLSYMSLRSNALSGTVKQQIVGCQSLTLLDLGDNTFTGSAPFSIIETKNLTYFNVSNNGFSGQIPEITTCEGLQFFDASGNALDGEIPSSITACKNLKLLALESNRLKGTIPLGIKDMGSLLVIKLGNNSVSGSIPKGFGNIQLLEVLDLHNLNLVGEIPKDISNCRFLLELNVSGNDLEGEIPQNLNNLTYLEVLDLHQNQLNGSIPTSVGNLSKIQYLDLSHNSLSGSIPFSFGNLNKLTHFNLSFNNLSGVIPTIASIQSFGSSAFSNNPYLCGVPLNTPCSAIGTTSQSTSRKPKLSVSAIIAIVAAVVILIGVCLVSIMNIKARSKKKDEQMMIVESTPPGSTESNVIIGKLVLFSKSLPSRYEDWEAGTKALLDKESLIGRGSIGTVYRTDFEGGISIAVKKLETLGRIRNQDEFEHEIGRISNLQHPNLVAFQGYYWSSTMQLILSEFVSNGNLYDNLHGFGYPGTSTSRGNRELIWSRSTERRRQKWKEIRAYKFS	721

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele51g0596	721	Gene3D	Ribonuclease Inhibitor	30	141	IPR032675	-
	Lele51g0596	721	Pfam	Leucine rich repeat N-terminal domain	31	69	IPR013210	-
	Lele51g0596	721	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	573	672	-	-
	Lele51g0596	721	Gene3D	Transferase(Phosphotransferase) domain 1	584	695	-	-
	Lele51g0596	721	Pfam	Protein tyrosine and serine/threonine kinase	599	683	IPR001245	GO:0004672\|GO:0006468
	Lele51g0596	721	ProSiteProfiles	Protein kinase domain profile.	596	721	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele51g0596	721	PANTHER	OS05G0588300 PROTEIN	212	331	-	-
	Lele51g0596	721	SUPERFAMILY	Protein kinase-like (PK-like)	585	688	IPR011009	-
	Lele51g0596	721	FunFam	Probable LRR receptor-like serine/threonine-protein kinase At1g12460	28	166	-	-
	Lele51g0596	721	Pfam	Leucine rich repeat	174	229	IPR001611	GO:0005515
	Lele51g0596	721	Pfam	Leucine rich repeat	410	468	IPR001611	GO:0005515
	Lele51g0596	721	SUPERFAMILY	L domain-like	166	493	-	-
	Lele51g0596	721	FunFam	probable LRR receptor-like serine/threonine-protein kinase At1g12460	167	504	-	-
	Lele51g0596	721	SUPERFAMILY	L domain-like	75	162	-	-
	Lele51g0596	721	Gene3D	Ribonuclease Inhibitor	235	504	IPR032675	-
	Lele51g0596	721	Pfam	Leucine Rich repeat	382	399	IPR001611	GO:0005515
	Lele51g0596	721	Gene3D	Ribonuclease Inhibitor	142	234	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele51g0596	Lele-ChrLele51	3575104	3577970	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele51g0596	23	703	Receptor kinase-like Gene Family	AT1G62950	61.272	0.0	809

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VII-1	Lele51g0596		PK_Tyr_Ser-Thr	4.6e-10	CL0016