Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0588 ATGGAAGCCAGGGATGGAATTAGCAGTGCAGTCACGGTGGTCGGATCAGATGATCCGTCGGAGTACCATGTAGCACCCCGGACCGAGAACCCAGCAACCACTGGCGGATCGATAACGCGTACGCCGGCTCCGGCGACTCAAGGGAGTGCTCCTCCGCCGCAGACGGCAGCAGCAGGAGGTACGCCGGGAACCATGACGATGCCGGGGAAGAAGAAAAGAGGCCGTCCGAGAAAGTACGGACCCGACGGGTCGGTGACCATGGCTCTATCTCCTAAACCAATATCTTCTTCGGCTCCACCCCATGTCATCGATTTCTCCGCAGATAAGCGCGGGAAAGTTCGTCCAGCTAGTTCGGTCAGCAAATCCAAATTCGAGGTTGAGAATTTAGGCGAATGGGTTGCATGCTCTGTAGGTGCTAATTTTACCCCCCATATAATCACCGTTAACGCTGGGGAGGACGTTACTATGAAGATAATATCATTTTCTCAGCAAGGACCTCGAGCTATATGTATTCTTTCTGCAAATGGAGTCATATCAAGTGTCACGCTTCGTCAACCTGATTCTTCTGGTGGCACATTGACCTATGAGGGACGTTTTGAAATTCTGTCGTTGTCTGGGTCCTTCATGCCAAGTGAAAGTGGGGGAACACGGAGCAGATCTGGCGGCATGAGCGTTTCGTTGGCAAGTCCAGATGGTCGTGTTGTAGGTGGTGGAGTGGCAGGTCTATTAGTAGCAGCAGGTCCTGTGCAGGTAGTGGTAGGAAGCTTTCTGGCAGGAAACCAGCATGAGCAAAAGCCAAAGAAACAGAAAATTGAGGTCATATCCACAGCCATACCAACTGCTGTTGTTCCCTTGTCTAGTGGTGTTACCGATCCGGTCCCTCTCCTCACCTCTTCGTCTTCCTTCCGTGGCAATAATTGGTCAGCAATCCCAGCAGATAACAGGAATAACATCGCCGCCGCCGCAAACACCAACAATAATAGTAATAGTAATAATAATAATAAGTCAGCTGATATTAATGTGTCACTGTCTGAAGGCACGTGGAAATTTGTAATGAAGTTGGGTTTGGCATATTTGGAACTGATAAGGATTGAATATGTTAGATGTTATAAGGAGAGTTTTGCGATGGATTATAGCAATGCCAAATCTTGGGAACTCTCCGAACAACCATACAAATTTGATTTCTATCAATCCCAGGAACATGCATTGCTGAAGGGAAACAGGATGAACGAGAACAATCTTAAAGTCATCTGGGAAGATATTTGA 1266 0.4818 MEARDGISSAVTVVGSDDPSEYHVAPRTENPATTGGSITRTPAPATQGSAPPPQTAAAGGTPGTMTMPGKKKRGRPRKYGPDGSVTMALSPKPISSSAPPHVIDFSADKRGKVRPASSVSKSKFEVENLGEWVACSVGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSESGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAAGPVQVVVGSFLAGNQHEQKPKKQKIEVISTAIPTAVVPLSSGVTDPVPLLTSSSSFRGNNWSAIPADNRNNIAAAANTNNNSNSNNNNKSADINVSLSEGTWKFVMKLGLAYLELIRIEYVRCYKESFAMDYSNAKSWELSEQPYKFDFYQSQEHALLKGNRMNENNLKVIWEDI 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0588 421 SUPERFAMILY AF0104/ALDC/Ptd012-like 140 260 - -
Lele51g0588 421 FunFam AT-hook motif nuclear-localized protein 1-like 143 274 - -
Lele51g0588 421 Gene3D - 143 276 - -
Lele51g0588 421 MobiDBLite consensus disorder prediction 30 54 - -
Lele51g0588 421 Pfam Plants and Prokaryotes Conserved (PCC) domain 143 256 IPR005175 -
Lele51g0588 421 MobiDBLite consensus disorder prediction 1 101 - -
Lele51g0588 421 CDD DUF296 142 233 IPR005175 -
Lele51g0588 421 ProSiteProfiles PPC domain profile profile. 138 277 IPR005175 -
Lele51g0588 421 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 43 325 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0588 Lele-ChrLele51 3517758 3522412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0588 6 316 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 62.048 1.04e-121 356