Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0569 ATGAATACGTTTTCACAAGTTCCTCCAGGCTTTCGGTTCCACCCTACAGATGAAGAACTGGTTGATTATTACCTAAGAAAAAAGGTAGCCTTCAAAAGGATTGACCTAGATGTTATTAAAGATGTGGATCTCTATAAAATAGAGCCATGGGATCTTCAAGGAGCGGAAGAACAAAATGAATGGTATTTCTTCAGCCACAAAGATAAGAAGTACCCAACTGGAACTCGCACGAATAGAGCCACAAAAGCAGGATTCTGGAAAGCAACAGGAAGAGACAAGGCAATCTACCGTAGGCATTGCCTCATTGGGATGAGAAAGACTCTTGTTTATTACAAGGGACGAGCGCCAAACGGACAGAAGTCTGACTGGATCATGCATGAATACCGACTTGAAACCAATGAAAATGGAACTACTCAGGAAGAAGGTTGGGTTGTATGTCGAGTGTTCAAGAAGAAAATGACAAGCGTGAGGAGGGTGGGGGATTTTGAGTCATCATGCTGGTTCGAGGACCAAGTCTCCTTGATGCAAGAGCTTGAATTTGCAAGACCAATTTCTCATCAACCTTATGCATCTAATTACCACCACCACCACCAGTACTACGTACCTTGCAAGCAGGAACTTCGTCAATTGCCATATAACGTAACCCATCCCCATGAAGCTTTCCTTCAGCTTCCCCAACTTGAAAGCCCCAGGGTTCCTTACTCAGCCGCCAGTTTGAGCTGCAACAATTCAGCGGTCCCTTATGCATATGACAGCAACAATAATAATGGAAGTAGCTTGCAGTCACCCAATTCACTCACTCAAGAGGAGAACATACCTTGTGGAAACAATAATGATCAAGTGACTGACTGGCGAGTTCTTGATAAATTTGTGGCTTCTCAACTCAGCAGTCAGCAGCAAGATGCTTCCAAGGAAGCCACCTATTCCAATGCAGAAGTGCTCCATGTGGATGAACCTGTCACTAAAAGGCCAGAAATTGCACAGCAGGAATATGCCTCCGCATCCACCTCGAGTTGCCAGATTGACCTGTGGAACTGA 1038 0.447 MNTFSQVPPGFRFHPTDEELVDYYLRKKVAFKRIDLDVIKDVDLYKIEPWDLQGAEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYRRHCLIGMRKTLVYYKGRAPNGQKSDWIMHEYRLETNENGTTQEEGWVVCRVFKKKMTSVRRVGDFESSCWFEDQVSLMQELEFARPISHQPYASNYHHHHQYYVPCKQELRQLPYNVTHPHEAFLQLPQLESPRVPYSAASLSCNNSAVPYAYDSNNNNGSSLQSPNSLTQEENIPCGNNNDQVTDWRVLDKFVASQLSSQQQDASKEATYSNAEVLHVDEPVTKRPEIAQQEYASASTSSCQIDLWN 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0569 345 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 293 - -
Lele51g0569 345 FunFam Nac domain-containing protein 86 16 154 - -
Lele51g0569 345 ProSiteProfiles NAC domain profile. 7 151 IPR003441 GO:0003677|GO:0006355
Lele51g0569 345 Pfam No apical meristem (NAM) protein 8 130 IPR003441 GO:0003677|GO:0006355
Lele51g0569 345 MobiDBLite consensus disorder prediction 252 278 - -
Lele51g0569 345 Gene3D NAC domain 16 155 IPR036093 GO:0003677|GO:0006355
Lele51g0569 345 SUPERFAMILY NAC domain 5 151 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0569 Lele-ChrLele51 3409207 3410448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0569 1 343 NAC Transcription Factor Family AT1G62700 53.218 1.29e-128 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele51g0569 NAM 3.8e-37 No_clan