Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0565 ATGGACTTGAAGTCGTCTCATGTATCTCCTGTTCTAACCGACCCTGTTCCTGTTAACAAGTCAAGACTAGGAATCCATTCTAGTGTATTAAGTTACTCACAGCAGGATCCACCTCCTAATACTCCAGGCAAGTATGCAAGAACCAGTTCGAGAAAAAGTGTTGGGAATCTTGATGATGTTCGCTCCAATGGATGGCTAGACGCCATGAAGGCTTCATCACCCCCGAGGAAGAAGCGGGTTAAGGGTTCTAATAACACTCAGGTCACTTATTTTGACTCTGACAATGAGGACTATAACTCCTGGATGCGCGATTATCCATCGGCACTGGACGCTTTTGACAAACTTGTTGAGCGTGCAAAGGACAAGAAGATTGCAGTATTTCTAGATTATGATGGAACTCTTTCCCCAATAGTGGACGATCCAGATTCTGCCTTTATGTCCGAAGCTATGCGGGCAACTGTGAGGAGAGTTACAAAGTATTTTCCCACGGCAATCATTAGTGGAAGAAGGCGTGATCAGGTTTTTGATTTAGTAAAATTGACGGAGCTCTACTATGCTGGGAGTCATGGGATGGACATCATGGGCCCTGCCTGTGAAGCTCTGCTCAATAACCATCCAAATTGTGTGAAATCTACTGACCATCAGGGAAATGAAATAACTCTGTTTCAACCCGCAAAAGAATTCCTGCCCATGATCGACGAGGTTTTTAGAACCCTCGTGGAGATAACTAGAGATATCGAAGGCGCAAAGGTTGAAAATCACAAGTTTTGCGCCTCTGTACATTATCGTAATGTAGATGAGAATAATTGGATAACTGTTGGACAACTTGTCCATGACAAGTTAAAAAACTACCCGCGTTTACGTTCAACTCACGGACGCAAGGTTTTAGAGGTGCGTCCGGCGATTGACTGGAACAAAGGAAAAGCAGTAGAGTTTTTACTGGAGTCTCTGGGGTTAAGTGACAGGGACGACGTGATTGCCTTCTACATTGGGGACGATAAGACGGACGAAGATGCGTTTAAGGTGTTGCGGGAGAACAAGAGGGGATATGGCATTGTGGTGTCGTCGGTGAGGAAAGAGAGCAACGCCGTTTTCTCGCTGAGGGACACGTCGGAGGTGATGAAGTTTCTGCAGCTTCTGGTGGATTGGAAGAGGCAACAAGACGACGACCAGAAGCAATCCCTATCACTTGGCTTCTGGTTTTGA 1206 0.4577 MDLKSSHVSPVLTDPVPVNKSRLGIHSSVLSYSQQDPPPNTPGKYARTSSRKSVGNLDDVRSNGWLDAMKASSPPRKKRVKGSNNTQVTYFDSDNEDYNSWMRDYPSALDAFDKLVERAKDKKIAVFLDYDGTLSPIVDDPDSAFMSEAMRATVRRVTKYFPTAIISGRRRDQVFDLVKLTELYYAGSHGMDIMGPACEALLNNHPNCVKSTDHQGNEITLFQPAKEFLPMIDEVFRTLVEITRDIEGAKVENHKFCASVHYRNVDENNWITVGQLVHDKLKNYPRLRSTHGRKVLEVRPAIDWNKGKAVEFLLESLGLSDRDDVIAFYIGDDKTDEDAFKVLRENKRGYGIVVSSVRKESNAVFSLRDTSEVMKFLQLLVDWKRQQDDDQKQSLSLGFWF 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0565 401 Pfam Trehalose-phosphatase 127 370 IPR003337 GO:0003824|GO:0005992
Lele51g0565 401 MobiDBLite consensus disorder prediction 29 57 - -
Lele51g0565 401 CDD HAD_TPP 125 375 - -
Lele51g0565 401 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 43 391 IPR044651 GO:0004805|GO:0005992
Lele51g0565 401 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 126 344 IPR006379 -
Lele51g0565 401 FunFam Trehalose 6-phosphate phosphatase 231 390 - -
Lele51g0565 401 Gene3D - 224 396 IPR023214 -
Lele51g0565 401 Gene3D - 124 211 IPR023214 -
Lele51g0565 401 TIGRFAM T6PP: trehalose-phosphatase 122 381 IPR003337 GO:0003824|GO:0005992
Lele51g0565 401 SUPERFAMILY HAD-like 125 384 IPR036412 -
Lele51g0565 401 MobiDBLite consensus disorder prediction 29 60 - -
Lele51g0565 401 FunFam Trehalose 6-phosphate phosphatase 225 301 - -
Lele51g0565 401 MobiDBLite consensus disorder prediction 65 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0565 Lele-ChrLele51 3363936 3365892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0565 120 382 Trehalose Biosynthesis Gene Families AT1G70290 26.259 1.99e-10 60.8