Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0549 ATGTTTGAGATAGACATGCAGTTGGAACGAAAAGAACAGGGAAAAACGAGAATTGACAGCTTAAATGGTTTTTCCGGTGATTTTAACCTAACAGAAGCTTTCGGGGGCAGCCAGCAGGAATCTCTAGTGAAGTGGATAAATAGTGTGCTTCCTCACTTAAATCTACCCATAGAAACTTCAGAGGAGGAACTAAGGGCATTGCTGAGGGATGGATCTGTATTATGCAGCATTTTGGACAAGCTGATTCCTGGTTCAGTGGGAGTAGGAGGTTATTCTTTGGATGAGCAAGTAAACATTAGAAGGTTTCTACAGGCTATGAATGAGCTGGGATTGCCTGGATTTGATTTGTCAAGGCTAGAGCAGGTATGGGACACTGGGACTCTTTGTTCATGCTTGATTGGAGGGTTGGTTAAAGAATACCTGGCTATAGGTACTCTTGCCACACATAACGGAAATCCGATGTACAATTTAGAAGTAAAATTGACTATTTTACCACTGGAACTTGGGAGGATGATAGTAATTCCTTTACATTTCTCTCCTGATGATGAAACAATACTCTTGGGTTCGATAGGGACTGCGTTGCAGTGCCTTGAGGTTCTGAAAACTCATTTTGCTTTAAATGTTGAGAGAGAAAATATCCAAAGTCTTTCCAGAAAGAGGTGGGATCAATCAGATCTAGCATACTGGGCCTATGGAAGTGAAGAGAGGCTAAAATTTTCAGGTGATTCAAATTTTGAACATGAAGTTGAGGGCTCTGTCCTATCAGATGAAGCTACTCTCACACATCATGTTGGATCTAAGTCTAAAGAACTCTTACAGTTGAAACGAGGATTGCATGTGGATCTTTCTGATAATAAAATTATGGAGTTACTCAAATTAAACAGTTTAGATGTAAGCCAAAGAGCTACTTGTCCATGTCTATGTCACCTCTGCATTAGTTTTTCACCCCTGCAGAATGCTTCGACTCAATCACTTTTTAACATAGGAAATAGGATTATGGATGATATCTTTGGAAGAAGGAATGGAGATGTGCCTCAATCTCAGCATGCAGCATTCCTGTTGAGAAAAATTCTTCAAGTGATAGAGTGGCGCTTTTCTAATCAAGCAGAAAGCCTGAAAAATCAAAACAGTCTATTCAAGGTTCGTGAGGGGAAGTACCAATTGAAAATAAATGCACTTGAAACCCTGGCAGCAGGGACAAATGAAGAGAATGAGTTTGCTCTTCAAGTTGAGAAAACTAAAATGGAGGAGAAAAACAGACTTGATGAGCAGGATGTTACTCGTTTAAAACAAGAAAAAGTTCGGGGTGAAATTGAGATTTCTGCATTGAAGCAAGAATTGGAAATGGTCAAAAAAGCACATGAAGAGCTCGGTATACAGTCAGGATTACGTGCTGAAGAATGCAAGTCAGAATACGAGAAGAGGATACGGGAACTAGAACGTGGTCTCTCTGATGCAAGGAATCAAGCCAAGAAATTGGAGGCCCTTATAGAATCAAAATCTCTTAAATGGAAGAACAAAGAGAATACCTATCAAAGTTTCATTAATTACCAATCCGGAGCATTCAAGGAATTGAGAGTTGCGATGGAATCTGTAAAAGACGATGCGCTAAAAACAAAAAGAAGCTACTCCGAAGAATTCGAGTATTTGGGGATGAAGCTCAAAAGTCTCGCTGAAGCTGCTGAAAATTATCATGTAGTTCTTACAGAAAATAGGAAATTATATAACGAAGTTCAAGATTTAAAAGAAGAAGTATTCCTGGATACCCAACCACTAATTCGTTCTGTACTTGATGGGTACAATGTTTGCATATTTGCGTATGGTCAAACTGGCTCAGGAAAGACATATACAATGAAAATCACGTGTAAGCATCAAGTATATGCAGACACAACATTTTTTATTTGTTTACTTTCTCCTTGGATTTCGAGGAAATTGAACAGAAGTATTCTTGACTTGCATACACTTGGGATTTTGAATTCTGCCCAACCAAATGGGTTGGTTGTTCCTGATGCAAGCTTGCATACGGTGAATTCTATGACGGATGTGCTGGAGTTGATGAACATTGGACTAACGAATCGGGCAACTGGTTCCACAGCCTTAAATGAAAGAAGGAGTGAGAGAGTAGAGCGTTCTGAAGCAACAGGAGATAGGCTTAAGGAGGCACAACATATAAATAAATCACTATCAGCACTTGGAGATGTGATTTTTGCTCTAGCACAAAAGAGTTCACATGTTCCTTATAGAAATAGTAAATTGACCCAGCTTCTTCAAAGTTCGATAGGTGGTCAAGCAAAAACCCTCATGTTTGTACAGCTTAACCCTGACACTGCTTCATATTCTGAAACGATAAGCACCTTGAAGTTTGCCGTGAGGGTTTCAGGTGTTGAGCTAGGTGCTGCTCGTAGTAATAGAGAGGGAAGGGATGTCAAAGAACTGTTAGAGCAGGTGGCATCTCTCAAAGATGCACTTGCAAGGAAGGATGAAGAGATTGAGCGGTTGCATCAGCTCAAGTCTAATCTCAATGTTGCCAAGCGTGAGATGATGAGGTATGGGTCATCATCTCCAAGGAGACATTCCACTGGAACTTCGAGGCATGGCACAAGACTTTCTGCGGCCGGGGCCTTGCGAGTTGGTGAAAAAACAGCTTCTGACATGGACAACTGCTCAGAGTATAGTGATAAGCATTCAGAAGCTGGTTCTCATCAGTCAATGGATGATCTCAGGATCAAGCCCACTTCCCCACTATTCAAATCATCCAAAGAAGATACAAGTCAGAATGTCAATGACGACATTGATCTCTTAGGTTTTGGAGATGCAGATTCTGAAGAGAGATTAAGTGATATATCTGACGGTGGTCTTTCAATGGGAACAGAAACTGATGGTTCTATCTGCAGCATTGTGGAGTACACTCTTTTCCCTGAAGAGGAGAAACCATCTGAAATTACCCCAAGTAAGAGCACAACAACAGACAACCCGTCAGCTGTAAACAAAGAGAAATCCACTTTGGCGTCCAAAATCCCCAAAGTCGCAGAAGTTCTACAAAAAGCACCAGTAAAATCTTCCAAGTTATCAATGAACAGAAGTTCCTCAAAGGTTTCCTCAAGCGTCAAGAAAACCGCTGCCGGTAGCTCAACTTCAGTGAAGGCCCCTCCTCCTAAACGATGGCAATAA 3171 0.4093 MFEIDMQLERKEQGKTRIDSLNGFSGDFNLTEAFGGSQQESLVKWINSVLPHLNLPIETSEEELRALLRDGSVLCSILDKLIPGSVGVGGYSLDEQVNIRRFLQAMNELGLPGFDLSRLEQVWDTGTLCSCLIGGLVKEYLAIGTLATHNGNPMYNLEVKLTILPLELGRMIVIPLHFSPDDETILLGSIGTALQCLEVLKTHFALNVERENIQSLSRKRWDQSDLAYWAYGSEERLKFSGDSNFEHEVEGSVLSDEATLTHHVGSKSKELLQLKRGLHVDLSDNKIMELLKLNSLDVSQRATCPCLCHLCISFSPLQNASTQSLFNIGNRIMDDIFGRRNGDVPQSQHAAFLLRKILQVIEWRFSNQAESLKNQNSLFKVREGKYQLKINALETLAAGTNEENEFALQVEKTKMEEKNRLDEQDVTRLKQEKVRGEIEISALKQELEMVKKAHEELGIQSGLRAEECKSEYEKRIRELERGLSDARNQAKKLEALIESKSLKWKNKENTYQSFINYQSGAFKELRVAMESVKDDALKTKRSYSEEFEYLGMKLKSLAEAAENYHVVLTENRKLYNEVQDLKEEVFLDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMKITCKHQVYADTTFFICLLSPWISRKLNRSILDLHTLGILNSAQPNGLVVPDASLHTVNSMTDVLELMNIGLTNRATGSTALNERRSERVERSEATGDRLKEAQHINKSLSALGDVIFALAQKSSHVPYRNSKLTQLLQSSIGGQAKTLMFVQLNPDTASYSETISTLKFAVRVSGVELGAARSNREGRDVKELLEQVASLKDALARKDEEIERLHQLKSNLNVAKREMMRYGSSSPRRHSTGTSRHGTRLSAAGALRVGEKTASDMDNCSEYSDKHSEAGSHQSMDDLRIKPTSPLFKSSKEDTSQNVNDDIDLLGFGDADSEERLSDISDGGLSMGTETDGSICSIVEYTLFPEEEKPSEITPSKSTTTDNPSAVNKEKSTLASKIPKVAEVLQKAPVKSSKLSMNRSSSKVSSSVKKTAAGSSTSVKAPPPKRWQ 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0549 1056 SMART kinesin_4 518 803 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele51g0549 1056 MobiDBLite consensus disorder prediction 853 867 - -
Lele51g0549 1056 Gene3D - 34 134 IPR036872 -
Lele51g0549 1056 Pfam Calponin homology (CH) domain 37 124 IPR001715 GO:0005515
Lele51g0549 1056 Gene3D Kinesin motor domain 553 704 IPR036961 -
Lele51g0549 1056 SMART ch_5 38 135 IPR001715 GO:0005515
Lele51g0549 1056 Pfam Kinesin motor domain 580 620 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele51g0549 1056 Pfam Kinesin motor domain 705 793 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele51g0549 1056 ProSiteProfiles Kinesin motor domain profile. 705 795 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele51g0549 1056 PRINTS Kinesin heavy chain signature 745 766 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele51g0549 1056 PRINTS Kinesin heavy chain signature 599 620 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele51g0549 1056 Coils Coil 564 584 - -
Lele51g0549 1056 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 582 833 IPR027417 -
Lele51g0549 1056 Gene3D Kinesin motor domain 705 837 IPR036961 -
Lele51g0549 1056 SUPERFAMILY Calponin-homology domain, CH-domain 35 125 IPR036872 -
Lele51g0549 1056 MobiDBLite consensus disorder prediction 1019 1050 - -
Lele51g0549 1056 MobiDBLite consensus disorder prediction 982 1000 - -
Lele51g0549 1056 Coils Coil 412 460 - -
Lele51g0549 1056 Coils Coil 469 503 - -
Lele51g0549 1056 MobiDBLite consensus disorder prediction 886 904 - -
Lele51g0549 1056 ProSiteProfiles Calponin homology (CH) domain profile. 36 139 IPR001715 GO:0005515
Lele51g0549 1056 Coils Coil 809 846 - -
Lele51g0549 1056 MobiDBLite consensus disorder prediction 849 929 - -
Lele51g0549 1056 MobiDBLite consensus disorder prediction 975 1056 - -
Lele51g0549 1056 PANTHER KINESIN-LIKE PROTEIN KLP-3 583 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0549 Lele-ChrLele51 3239513 3247003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0549 574 829 Calmodulin-binding Proteins AT5G65930 32.803 3.65e-34 140