Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0548 ATGGTTGGGGAATTAGGAATGGGGCCTCGTGTGAAAAGCTTAAAGAAAAAATGGATCGATGCATATGCTTTGGGTAGTTATCGTCACAGTCAAGTGCTAGGAGTCCGCCACCCCCAACCTCAATTGGGAGCTAAAAAAAGCTTCAAAGTGACATTCAATTATGAAATCTTGACGCCTGATTCTACCATCTTTTCCGAGTTTAAGATGGGGTGTGATTTTTCCAAGTTATCAGCATGCTGCTCGGGTACAGAGCAAAGTGGTCCAGTTCCTGAAGCAAACATTGATGAAAATGAAGAGAATCATGGGGCCACTGATGTGCCATCGTTTCAAGAATATACAATTGATCAGCTTAGGAAGGCTACTTCTGGATTTGCCGTCGAGAATATAGTTTCTGAGCATGGAGAAAAGGCTCCAAATGTGGTTTATAAAGGAAAACTAGAAAATCAAACTCGAATTGCTGTCAAGCGGTTCAATAGATCAGCCTGGCCTGATGCTCGACAATTTTCGGAAGAAGCCAGGGCTGTTGGACATCTAAGGAACGAAAGATTGGCAAATCTACTTGGATGTTGCAGTGATGGTGATGAGAGGTTACTTGTGGCAGAATATATGCCTAATGATACTTTGGCAAAGCATTTGTTCCACTGGGAAACTCAGCCCATGAAATGGGCAATGAGACTAAGAGTTGCTTTATACCTTGCCCAAGCGCTAGAATATTGTACTAGCAAAGGGCGTGCACTATATCATGATCTAAATGCATATAGAGTACTTTTTGGTGATGAAGGAAATCCTAGGCTCTCATGCTTTGGTTTGATGAAAAACAGTCGGGATGGTAAAAGTTATAGTACAAACCTGGCCTTTACCCCGCCTGAGTATTTAAGGACAGGTAGAGTTACTCCTGAAAGTGTAACATATAGTTTTGGAACCCTTTTGCTCGACCTTCTCAGCGGAAAACATATTCCTCCAAGCCATGCACTTGACCTGATTCGAGACAGGAACCTTCAAATGCTGACAGATTCTTGTTTAGAAGGACAATTTTCAAATGATGAGGGGACTGAATTAGTGCGCTTAGCCTCACGATGTTTACAATCAGAACCACGGGAGCGTCCTTATCCAAAGTCGTTAGTTTCTGCTTTAATACCCCTACAGAAGGATTCTGAGGTTCCTTCTCATGTTTTGATGGGTATACCACATGGCACAAATGCTTTACCCCTTTCACCATTTGGTGAGGCATGTCTAAGAATGGATTTGACCGCCATCCATGAGGTCCTTGAAAAACTTGGGTATAAAGATGACGAGGGTGCGGCTACTGAGCTTTCATTCCAAATGTGGACCAACCAGATGCAGGAAACATTGAACTCAAAGAAGAAGGGTGATTCTGCTTTTCGTCATAAAGACTTCAAAGCTGCAATTGATAGCTATACTCAGTTCATAGATGTTGGAACTATGGTTTCTCCTACTGTTTATGCACGCCGCAGTCTGTCTTATCTCATGAACAACATGCCAGAAGAAGCACTGAAGGATGCATTGCAGGCACAGATAGTTTCTCCTGTTTGGTATATAGCGTCCTACTTACAAGCTGTGGCACTTCTTGCATTGGGCAGGGAAAATGAGGCCCAGGCGGCACTTAGAGAGGCTTCTTCACTTGAAAGTAAAAGGAACACAAATTAA 1668 0.4293 MVGELGMGPRVKSLKKKWIDAYALGSYRHSQVLGVRHPQPQLGAKKSFKVTFNYEILTPDSTIFSEFKMGCDFSKLSACCSGTEQSGPVPEANIDENEENHGATDVPSFQEYTIDQLRKATSGFAVENIVSEHGEKAPNVVYKGKLENQTRIAVKRFNRSAWPDARQFSEEARAVGHLRNERLANLLGCCSDGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALYLAQALEYCTSKGRALYHDLNAYRVLFGDEGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSNDEGTELVRLASRCLQSEPRERPYPKSLVSALIPLQKDSEVPSHVLMGIPHGTNALPLSPFGEACLRMDLTAIHEVLEKLGYKDDEGAATELSFQMWTNQMQETLNSKKKGDSAFRHKDFKAAIDSYTQFIDVGTMVSPTVYARRSLSYLMNNMPEEALKDALQAQIVSPVWYIASYLQAVALLALGRENEAQAALREASSLESKRNTN 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0548 555 MobiDBLite consensus disorder prediction 85 107 - -
Lele51g0548 555 Gene3D Tetratricopeptide repeat domain 444 554 IPR011990 GO:0005515
Lele51g0548 555 Pfam Protein tyrosine and serine/threonine kinase 140 377 IPR001245 GO:0004672|GO:0006468
Lele51g0548 555 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 91 554 IPR045845 GO:0004672|GO:0009742
Lele51g0548 555 SUPERFAMILY Protein kinase-like (PK-like) 102 388 IPR011009 -
Lele51g0548 555 Gene3D Transferase(Phosphotransferase) domain 1 204 395 - -
Lele51g0548 555 FunFam probable serine/threonine-protein kinase At5g41260 204 395 - -
Lele51g0548 555 Gene3D Phosphorylase Kinase; domain 1 97 202 - -
Lele51g0548 555 FunFam probable serine/threonine-protein kinase At4g35230 99 202 - -
Lele51g0548 555 FunFam probable serine/threonine-protein kinase At4g35230 448 555 - -
Lele51g0548 555 SUPERFAMILY TPR-like 454 550 IPR011990 GO:0005515
Lele51g0548 555 ProSiteProfiles Protein kinase domain profile. 127 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0548 Lele-ChrLele51 3225388 3237101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0548 97 378 Glycoside Hydrolase AT3G07070 33.871 7.26e-41 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lele51g0548 PK_Tyr_Ser-Thr 1.1e-25 CL0016