Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0526 ATGGTTCGTTTATCTCCTTTTCCTTCTCTTGTCTGAAAGAGAAAGGAGGAGCGTGGTTTTGGTCGACTTTGTTCATGCGTCATTCAACCACTCATGTGGCCCCTGATCGGTGCCAGCCAAGCCGGCCATGGCGCTTTTTTACTTGTTCAGAACGTTAGCTTCAAGGGATTGAAAATGGTGAAGATAGAATTTGGTAGCTTTCCTGACTCTTTTAGCGTTAATGCCATTAAGGCTTATGTAGCAGAGTTCATCGCTACTCTTCTTTTCGTCTTTGCCGGCGTTGGATCAGCCATCGCTTACGGTGAGCTTACGGCGGATGCAGCGTTAGATGCGCCGGGACTGGTGGCTGTAGCGGTGGCGCACGCGTTTGCCTTGTTTGTAGGGGTGGCGGTGGCAGCCAACATCTCAGGCGGCCATTTGAATCCCGCGGTTACTTTTGGATTGGCAATTGGAGGCAACATCACCATCTTAACTGGCATCATGTACTGGATTTTCCAATTGCTTGGCTCCATCATCGCATGTCTCCTCCTCAAATTTGTTACTGGTGGAAAGATCATTCCAACCCATGGACTAGCAGCAGGTGTGGGTGCGGGACAAGGTGTAGTTTTTGAGATTATTGTTACTTTTGCGTTGGTTTACACTGTGTATGCAACAGCGGCTGATCCCAAGAAGGGTTCTCTTGGGACTATTGCACCCATTGCAATTGGGTTCATTGTGGGTGCCAACATCTTGGCTGCCGGTCCATTTAGTGGCGGTTCAATGAACCCAGCTCGTTCATTCGGCCCAGCTGTGGTCAGCGGCAACTTCGCAGATAACTGGATTTACTGGGTTGGGCCATTGGTCGGTGGCGGCTTGGCCGGCTTGGTCTATGGTGATATCTTCATTGGTTCATACGCTCCAGTTCCTGCGGCTGAAAGCTACCCTTAA 927 0.5016 MVRLSPFPSLVXKRKEERGFGRLCSCVIQPLMWPLIGASQAGHGAFLLVQNVSFKGLKMVKIEFGSFPDSFSVNAIKAYVAEFIATLLFVFAGVGSAIAYGELTADAALDAPGLVAVAVAHAFALFVGVAVAANISGGHLNPAVTFGLAIGGNITILTGIMYWIFQLLGSIIACLLLKFVTGGKIIPTHGLAAGVGAGQGVVFEIIVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGNFADNWIYWVGPLVGGGLAGLVYGDIFIGSYAPVPAAESYP 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0526 308 PANTHER AQUAPORIN-8 62 296 IPR034294 -
Lele51g0526 308 CDD MIP 77 290 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele51g0526 308 Gene3D Glycerol uptake facilitator protein. 60 299 IPR023271 -
Lele51g0526 308 TIGRFAM MIP: MIP family channel proteins 81 290 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele51g0526 308 ProSitePatterns MIP family signature. 139 147 IPR022357 -
Lele51g0526 308 PRINTS Major intrinsic protein family signature 158 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele51g0526 308 PRINTS Major intrinsic protein family signature 203 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele51g0526 308 PRINTS Major intrinsic protein family signature 121 145 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele51g0526 308 PRINTS Major intrinsic protein family signature 273 293 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele51g0526 308 PRINTS Major intrinsic protein family signature 77 96 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele51g0526 308 PRINTS Major intrinsic protein family signature 236 258 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele51g0526 308 SUPERFAMILY Aquaporin-like 71 296 IPR023271 -
Lele51g0526 308 FunFam Probable aquaporin TIP1-1 60 306 - -
Lele51g0526 308 Pfam Major intrinsic protein 72 290 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0526 Lele-ChrLele51 3095189 3098253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0526 59 305 Major Intrinsic Protein MIP AT5G47450 78.947 3.36e-136 384