Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0518 ATGGAAGGTGTTGATTACTTGGCCTCCGAGAGGAGCAAAGCTCAGTTCGATGTCGAAGAGATGAAAATCGTCTGGGCTGGTTCTCGTGAAGCTTTTGAAGTTTCCGATCGAATGGCTCGCCTTGTTGCCAGCGATCCGGTATTCAGAAAGGATAATAGGCCCATGCTTGACAGAAAAGAATTATTTAAGAACACTTTGAGGAAAGCAGCTCATGCTTGGAAAAGGATAATTGAGCTTCGCCTCACTGAAGAGGAAGCTTCTAGACTTAGATTCTATGTGGATCAACCTGCATTTACGGATCTTCATTGGGGAATGTTTATCCCAGCTATAAAGGGACAAGGAACTGAGGAGCAGCAGCAGGAATGGATGCCTTTGGCTTATAAGATGCAAATAATTGGTTGCTATGCCCAAACTGAACTTGGTCATGGATCCAATGTTCAAGGGCTCGAAACAACTGCAACCTTTGATCCTCAAACCGATGAGTTTGTGATTAATAGCCCCACCCTAACTTCCAGCAAATGGTGGCCTGGTGGATTGGGTAAAGTTTCCACACATGCTGTTGTCTATGCCCGTCTAATCACTGAAGGTCATGACCAAGGAGTGCATGGGTTCATTGTCCAGCTGCGGAGCTTGGATGATCACTTGCCTCTCCCAGGCATAACAGTTGGTGATATTGGAATGAAATTTGGAAATGGGGCATACAACTCTATGGATAATGGGGTTCTAAGATTTGATAATGTAAGAATTCCAAGGAATCAAATGTTGATGAGGGTTTTACAGGTTACAAGAGAAGGAAAATGTGTCCAATCTAATGTTCCACGGCAATTAGTTTATGGTACGATGGTATATGTGAGACAATCAATTGTGTCTGATGCATCAAGTGCTTTGTCACGAGCAGTTTGCATTGCTACAAGATATAGTGCTGTTCGAAGACAGTTTGGCTCACATAACGGAGGCCTTGAAACACGGGTGATTGATTACAGAACTCAGCAAGCTAGGCTCTTCCCCTTGCTAGCTTCTGCATATGCTTTCAGATTCGTTGGTGAATGGTTGAAATGGCTATATGTGGATGTGACCCGAAGGTTGCAGGCCAATGATTTTTCAACATTACCTGAGGCTCATGCATGCACTGCAGGATTGAAGTCCTTGACTACATCAGCTACTGCAGATGCGATTGAAGAATGCCGAAAACTTTGTGGTGGTCATGGTTACCTTTGTAGCAGTGGCCTTCCTGAGTTATTTGCAGTATATGTTCCTACCTGCACTTATGAAGGAGACAATGTTGTGCTGCTTTTACAGGTAGCAAGGCATCTCATGAAGACTGTCTCTCAGCTGAGCTCCGGGAAAAAGCCCGTCGGTACCACTGCTTATATGGGTCGAGTGGAACATCTGATGCAATGTCCCTCTGATGTTCATAAAGCTGAGGATTGGTTGAAGCCTAATGTAGTGCTGGAAGCATTTGAAGCTAGGGCTGCTAGGATGTCTGTTGGCTGTGCTCAAGCTCTTAGCAAGTTTACCAATCCAGAAGAAGGTTTTCAACAACTGTCAGCTGATTTAGTTGAGGCAGCAATTGCTCACTGCCAGTTGATTGTTGTTTCCAAATTTTTGGAGAAGTTGCAGCAAGATATACCTGGAGAGGGAGTGAAACAGCAATTACAAATTCTTTGTAGCGTATATGCTTTGTTTCTTGTTCATAAGAATCTGGGCGATTTTCTCTCCACTGGCTGCATCACTGCCAAACAGGGTTCACTTGCCAACGATCAGCTGAGGTCCCTATATTCCCAGGTTCGCCCTAATGCAATTGCACTTGTCGATGCATTCAATTACACCGATCACTACCTTAGTTCGGCTCTGGGTCGTTACGATGGAAATGTGTATCCGACACTGTATGAGGAGGCGTGGAAGGATCCTCTGAATGATTCGGTTGTGCCAGACGGTTACCAGGAATATGTTCGACCAATGCTGAAGCAACAACTTCGGAATGCTAGACTCTAA 1995 0.4471 MEGVDYLASERSKAQFDVEEMKIVWAGSREAFEVSDRMARLVASDPVFRKDNRPMLDRKELFKNTLRKAAHAWKRIIELRLTEEEASRLRFYVDQPAFTDLHWGMFIPAIKGQGTEEQQQEWMPLAYKMQIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVINSPTLTSSKWWPGGLGKVSTHAVVYARLITEGHDQGVHGFIVQLRSLDDHLPLPGITVGDIGMKFGNGAYNSMDNGVLRFDNVRIPRNQMLMRVLQVTREGKCVQSNVPRQLVYGTMVYVRQSIVSDASSALSRAVCIATRYSAVRRQFGSHNGGLETRVIDYRTQQARLFPLLASAYAFRFVGEWLKWLYVDVTRRLQANDFSTLPEAHACTAGLKSLTTSATADAIEECRKLCGGHGYLCSSGLPELFAVYVPTCTYEGDNVVLLLQVARHLMKTVSQLSSGKKPVGTTAYMGRVEHLMQCPSDVHKAEDWLKPNVVLEAFEARAARMSVGCAQALSKFTNPEEGFQQLSADLVEAAIAHCQLIVVSKFLEKLQQDIPGEGVKQQLQILCSVYALFLVHKNLGDFLSTGCITAKQGSLANDQLRSLYSQVRPNAIALVDAFNYTDHYLSSALGRYDGNVYPTLYEEAWKDPLNDSVVPDGYQEYVRPMLKQQLRNARL 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0518 664 Gene3D - 276 449 - -
Lele51g0518 664 FunFam Acyl-coenzyme A oxidase 17 132 - -
Lele51g0518 664 Gene3D - 133 268 IPR046373 GO:0016627
Lele51g0518 664 Pfam Acyl-CoA dehydrogenase, middle domain 134 247 IPR006091 GO:0016627
Lele51g0518 664 Gene3D - 17 132 IPR037069 GO:0016627|GO:0050660
Lele51g0518 664 Gene3D - 480 608 - -
Lele51g0518 664 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 463 657 IPR036250 GO:0016627
Lele51g0518 664 PANTHER ELECTRON TRANSPORT OXIDOREDUCTASE 4 655 IPR012258 GO:0003997|GO:0005777|GO:0006631|GO:0071949
Lele51g0518 664 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 276 459 IPR036250 GO:0016627
Lele51g0518 664 Pfam Acyl-coenzyme A oxidase N-terminal 17 132 IPR029320 -
Lele51g0518 664 FunFam Acyl-coenzyme A oxidase 276 449 - -
Lele51g0518 664 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 7 259 IPR009100 GO:0016627
Lele51g0518 664 PIRSF Acyl-CoA_oxidase 1 659 IPR012258 GO:0003997|GO:0005777|GO:0006631|GO:0071949
Lele51g0518 664 FunFam Acyl-coenzyme A oxidase 480 608 - -
Lele51g0518 664 Pfam Acyl-CoA oxidase 480 656 IPR002655 GO:0003997|GO:0005777|GO:0006635
Lele51g0518 664 FunFam Acyl-coenzyme A oxidase 133 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0518 Lele-ChrLele51 3054932 3060212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0518 1 664 Acyl Lipid Metabolism Gene Families AT4G16760 79.669 0.0 1113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0518 51 3054932 3060212 Lele53g0327 53 2838818 2839543 CCT
Lele51g0518 51 3054932 3060212 Lele54g0328 54 2848210 2849668 CCT
Lele51g0518 51 3054932 3060212 Lele55g1158 55 18142148 18142873 CCT
Lele51g0518 51 3054932 3060212 Lele56g1107 56 14548948 14550740 CCT
Lele49g0502 49 2997308 3004896 Lele51g0518 51 3054932 3060212 hybridization
Lele50g0533 50 3199740 3206259 Lele51g0518 51 3054932 3060212 hybridization