Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0517 ATGACTCGGCGGTGTTCTCATTGCAGCTACAATGGCCATAACTCAAGGACTTGCCCGAACCGCGGTGTTAAGCTCTTTGGAGTTCGATTGACTGAAGGCTCGATCCGGAAGAGTGCTAGTATGAGTAGTCTCAGCCACTATGCTGGCTCGAGCTCCGGAGCTCATCATGCTGGTTCCGTCAATCCGGGTTCGCCCGGTGACACGCCTGATCATGGTGCTACAACCGACGGTTACGCCTCCGAGGATTTTGTTCCTGGTGTTCCGTGGACTGAGGAGGAACATAGATTGTTCTTACTTGGATTGCAGAAGCTTGGCAAAGGTGATTGGCGTGGAATTGCACGGAATTATGTCATATCAAGAACACCTACTCAAGTAGCAAGCCATGCTCAGAAATATTTCATCAGGCAAAGCAACGTGTCTAGAAGGAAAAGACGTTCAAGTTTGTTTGACATTGTTGCTGATGAAGTTAAAAATCCCCCAAAACCAATTTCTCTTGACATTATGCTCCACATAGATGGTCAATTGTCATGTTTGAAAATTACTGCTGATACATCGAAGGCAGAACAAGACTTCTTGCTGGCTAGTCAGCCAGAGGCTGAAACGGAAGTCAATGACCCCTTGCCAGCTCCCGCAGCCATTGATGAAGAGTGTGAATCCATGGATTCTGATTGTTCAAATGATGGAGACTCTGCCTCTTTGAAGCCAGATAGCTCACAGCCACACCCACAGTTCCCGGTGGTATATCCTGCTTACTTTTCTCCTTTCGTCCCATTTCCTCTGCCTTATTTATACAGTCCAGAGCCCAACAAGAAGGAGACAGTACATGAAGTGCTGAAGCCTACGGCAGTACATTCCAAAAGCCCCATCAATGTTGATGAATTGGTCGGCATGTCAAAACTCAGTTTAGGTGACTCTATTGGTGACTCTGGCCCTTCCTCTCTTTCCCTAAAACTCCTCAAGGGACCCTCTCGGCAGTCAGCTTTTCATGCAACTCCCTCATATGGTGATTTAGACATGAATGGCAATGCAATCCCTGCAGTTTAA 1044 0.4722 MTRRCSHCSYNGHNSRTCPNRGVKLFGVRLTEGSIRKSASMSSLSHYAGSSSGAHHAGSVNPGSPGDTPDHGATTDGYASEDFVPGVPWTEEEHRLFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADEVKNPPKPISLDIMLHIDGQLSCLKITADTSKAEQDFLLASQPEAETEVNDPLPAPAAIDEECESMDSDCSNDGDSASLKPDSSQPHPQFPVVYPAYFSPFVPFPLPYLYSPEPNKKETVHEVLKPTAVHSKSPINVDELVGMSKLSLGDSIGDSGPSSLSLKLLKGPSRQSAFHATPSYGDLDMNGNAIPAV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0517 347 MobiDBLite consensus disorder prediction 45 84 - -
Lele51g0517 347 ProSiteProfiles SANT domain profile. 89 137 IPR017884 -
Lele51g0517 347 Pfam Myb-like DNA-binding domain 88 133 IPR001005 -
Lele51g0517 347 SUPERFAMILY Homeodomain-like 86 138 IPR009057 -
Lele51g0517 347 PANTHER TRANSCRIPTION FACTOR KUA1 3 285 - -
Lele51g0517 347 SMART sant 85 135 IPR001005 -
Lele51g0517 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 137 IPR017930 -
Lele51g0517 347 FunFam transcription factor MYB1R1 87 138 - -
Lele51g0517 347 ProSiteProfiles Myb-like domain profile. 88 133 IPR001005 -
Lele51g0517 347 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 86 136 IPR006447 GO:0003677
Lele51g0517 347 Gene3D - 87 139 - -
Lele51g0517 347 MobiDBLite consensus disorder prediction 217 240 - -
Lele51g0517 347 MobiDBLite consensus disorder prediction 224 239 - -
Lele51g0517 347 CDD SANT 88 133 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0517 Lele-ChrLele51 3049601 3051633 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele51g0517 Myb_DNA-binding 3.5e-11 CL0123