Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0508 ATGATGACCAATCAAGCCGAGTTTTCCGCCCTCGAACGCATCAAATTACATCTTCTAGGTGGACTCTCTCCGCTGCCAAGTTCTCAATTTTGGTTTGAGGAAGCCAACTCATCTATTTCAACTTCTCAATCTCTCTGTTCCCAATCTTCCATTTCTGACGCTAATTCCATCTTGTCCGATTGCTTTCCTGATATCCTCGACTTCCCCACCAATCCCGTACCTTCATCACAAGATCAAATGAATCCGTTTGAATTCGAGTCTAAACCCCAAATAATTGACCTCGCAACGCCAAATTCCCAAGTCCAAGATTCGCAATTCAAAACAAGGTTTCCCAAACTCGAATCTAACACACTGGAAAGCTCTCCTGCAAACAGTTGCGTGTTGGATTTCGACCCGAGATTTCATGAATCGCAGAAGAAATCTCCTTCGAGTAGGAAACCGACGTTGCAAATCTCGCTTCCGAAGAAAACCGAGTGGATCCAGTTTGGGAATCCGGAGCAGCAAGAGGAGGCAGCCGAGGGTTTGGAGCAGAAAAACCCAAAGGAAGTCGAGAAAAAGCACTATAGAGGAGTCCGACAGAGGCCGTGGGGCAAATATGCGGCGGAGATCCGGGACCCGAACAAGCGGGGATCCAGGGTGTGGTTGGGAACATTCGACACAGCTATCGAAGCCGCCAAAGCCTACGATCGAGCTGCCTTCAAGCTTCGGGGCTCCAAGGCCATCCTAAACTTCCCTTTAGAAATAGAAACATCGAGCTCGGTGGTTAGCTCCGGAGAGGGGAAACGCCGTCGACAAGACGAAGAGGAGTTGGAGGTAAAGGCGGTGGCGAAGAAGGCGAAAACTACGACGGAATCGGAGTCTCAGGAGAAGGGTACAAAGGACGCCCCGTTAACACCCTCTAATTGGAAGGGGTTCTGGGACAACGATTTAAACGGGATTTTCAGTGTCCCGCCGTTATCTCCTCTCCCTCCATTGGGTTGTCCCCAGCTTATGGTTGTATGA 1002 0.497 MMTNQAEFSALERIKLHLLGGLSPLPSSQFWFEEANSSISTSQSLCSQSSISDANSILSDCFPDILDFPTNPVPSSQDQMNPFEFESKPQIIDLATPNSQVQDSQFKTRFPKLESNTLESSPANSCVLDFDPRFHESQKKSPSSRKPTLQISLPKKTEWIQFGNPEQQEEAAEGLEQKNPKEVEKKHYRGVRQRPWGKYAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDRAAFKLRGSKAILNFPLEIETSSSVVSSGEGKRRRQDEEELEVKAVAKKAKTTTESESQEKGTKDAPLTPSNWKGFWDNDLNGIFSVPPLSPLPPLGCPQLMVV 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0508 333 MobiDBLite consensus disorder prediction 253 300 - -
Lele51g0508 333 FunFam Ethylene-responsive transcription factor 2 186 247 - -
Lele51g0508 333 ProSiteProfiles AP2/ERF domain profile. 187 245 IPR001471 GO:0003700|GO:0006355
Lele51g0508 333 SMART rav1_2 187 251 IPR001471 GO:0003700|GO:0006355
Lele51g0508 333 PRINTS Ethylene responsive element binding protein signature 188 199 IPR001471 GO:0003700|GO:0006355
Lele51g0508 333 PRINTS Ethylene responsive element binding protein signature 227 247 IPR001471 GO:0003700|GO:0006355
Lele51g0508 333 PANTHER DNA-BINDING DOMAIN 137 287 IPR044808 GO:0003700|GO:0009873
Lele51g0508 333 Pfam AP2 domain 187 237 IPR001471 GO:0003700|GO:0006355
Lele51g0508 333 SUPERFAMILY DNA-binding domain 187 247 IPR016177 GO:0003677
Lele51g0508 333 Gene3D AP2/ERF domain 186 247 IPR036955 GO:0003700|GO:0006355
Lele51g0508 333 CDD AP2 186 245 IPR001471 GO:0003700|GO:0006355
Lele51g0508 333 MobiDBLite consensus disorder prediction 259 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0508 Lele-ChrLele51 2990908 2991909 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0508 2 333 AP2-EREBP Transcription Factor Family AT5G47230 42.690 3.16e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele51g0508 AP2 5.1e-16 CL0081