Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0506 ATGTCAAATCCAGAAGTGCCATCAGGATCGCACGTTCAGCTCACACCAACAGGTCTCAGTCTCACTAATCCTCAAGGTCAAGCTATTAGGAATGCTACATCACAAGAAAATGTGTCCCATGGAGCTATGTTGGACACTGGAAACTTTGTTCTGGCGTTCTCAAAATCTTCCTATTTATGGCAAAGTTTCGACAATCCCACTGATACACTGTTGCGAAACCAAAATCCCGAGTCTCAACGCAACCAGCAAGTTTGGTCAATTGTGGAGTATGTTCCAAATAACATTTGCATTAAAATTTCAGTGATTTGGGTAGTGGTTGCTGTGGAATCAAAAACCAATCCTGAAGAGGTTTATGAGTTTAAGGTTATTCAAAATGTAGATTGGCCCTTAGGAGATTATGAAAGATTGTACAATTATACCCAAGATGAATGCCAAACATCTTGCTGGTATGGTTGTAATTGTGCAGTTGCCATTTTTGACAATTGTGGTACTTCTTGGAAGAAAAGATTACCACTTTCTAATGGAAGAGGAAATGCAGGTACATTGAAAGAGGCAACTCATGGGTTCAATGAAGAGCTAGGAAGGGGTTCGTTTGGGATTGTGTACAAAGGCAACCTTAAATCAGGAACTAATAATAACGATAACGTTGTTGTGGTGAAGAGGTTGGATAGATTGGCTCAAGAACGAGAGAAGGAGTTCAGAACAGAGGGGAGTGCCATTGGGAAAACATGCCACAAAAATTTGCTAGGAGGAAGAATAGAGATTCTGGTAGAGAATGATAAGGAAGCCATGGCTGACATAGAGGTTGAAGAAGATGGTGATGATAGCGATATGAAAATTCTAGATCAAACCATTGTCTGGAACGCAGATATCCAAGCTCCAATACCACTAGGATCCATGCTTAAGCTCACGACAAGGGGTCTCTCACTCATTAAACCCCAAGGTGAAGTTATATCTGTGTGGCCAACTGGACTACAGGGAAGTGTGTCCTATGCAGAAATGCGTAAGGATGGAAATTTTGTTCTGATGGCATCCTCAAATTCTTCTTATTTGTGGCAAAGTTGCAACTATCCTACCGACACACTCTTACCCACACAAACCTTGGGATTTCAACAAAGAAGCTTGGAGATGGATCTGAATGAAGAAGTGGAGGAAAACGAGGCCATACTGACAGATTGCGCATATGATTGCTATATGGAGAGAAGAACAGAGATTTTGGTAGAGAATGATAAGGAGGCCATGGCTGACACAAGGAGGGTGAAGAAATGGGATGACAGCGTTATGGAGCATTTAAGAGAATCCAAAAATAAGGCCGAGCATGAAGACTGTGATGCAAATGTTGGAAGGCCTTGTTGA 1356 0.4174 MSNPEVPSGSHVQLTPTGLSLTNPQGQAIRNATSQENVSHGAMLDTGNFVLAFSKSSYLWQSFDNPTDTLLRNQNPESQRNQQVWSIVEYVPNNICIKISVIWVVVAVESKTNPEEVYEFKVIQNVDWPLGDYERLYNYTQDECQTSCWYGCNCAVAIFDNCGTSWKKRLPLSNGRGNAGTLKEATHGFNEELGRGSFGIVYKGNLKSGTNNNDNVVVVKRLDRLAQEREKEFRTEGSAIGKTCHKNLLGGRIEILVENDKEAMADIEVEEDGDDSDMKILDQTIVWNADIQAPIPLGSMLKLTTRGLSLIKPQGEVISVWPTGLQGSVSYAEMRKDGNFVLMASSNSSYLWQSCNYPTDTLLPTQTLGFQQRSLEMDLNEEVEENEAILTDCAYDCYMERRTEILVENDKEAMADTRRVKKWDDSVMEHLRESKNKAEHEDCDANVGRPC 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0506 451 SUPERFAMILY alpha-D-mannose-specific plant lectins 35 76 IPR036426 -
Lele51g0506 451 Gene3D - 255 356 IPR036426 -
Lele51g0506 451 MobiDBLite consensus disorder prediction 1 25 - -
Lele51g0506 451 Pfam D-mannose binding lectin 13 80 IPR001480 -
Lele51g0506 451 Pfam D-mannose binding lectin 284 374 IPR001480 -
Lele51g0506 451 SUPERFAMILY Protein kinase-like (PK-like) 190 249 IPR011009 -
Lele51g0506 451 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 181 248 - -
Lele51g0506 451 Gene3D Phosphorylase Kinase; domain 1 167 250 - -
Lele51g0506 451 Pfam Protein tyrosine and serine/threonine kinase 189 249 IPR001245 GO:0004672|GO:0006468
Lele51g0506 451 SUPERFAMILY alpha-D-mannose-specific plant lectins 286 371 IPR036426 -
Lele51g0506 451 ProSiteProfiles Bulb-type lectin domain profile. 231 355 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0506 Lele-ChrLele51 2973297 2980158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0506 182 249 Receptor kinase-like Gene Family AT1G55610 42.857 2.75e-08 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele51g0506 B_lectin 2.7e-13 No_clan