Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0491 ATGGAGAATACGCTGCATTCAAAGTCATTAACCAAGGTTACATCAATCAATAACAGCAATAACGATGAAAGATCTGGGAAACCATGGATGGAAAATGGGCATTGCACTGTGCCTACCCAGCTCAAATTTAAGTGCCGAAAAGTGTCTTCCGTTCGCGATTATCCTGAAGGTTGTGGACGGTTTGCGCCCAGAATTAATTTAACACCAAATGTAAATACTGCTAATGTTGGTATTGGTGAAGGTACACTAGTTGAGGATAATAGTGGTGAAGATATAAAGGATGAATTTGTTAGAGCTTGCGAGGTTGAACATGAGTCCCAACATGCTGTGTTGGTGGGCTTAGACTCTGGGACTCTAGGACAATCCAATCACCATAGTCTGAAGAAGGAAATACCAATGGTCTCATCTAAAATTGTGGATGAGCCTCCTTTGACAAATGATGAAACTGTAAAAATGGGGTTGGTGAGCTTGAAAGATTTGGAATCCAGAAGAGCTGCAGAAGCGGTAAATTGTGATACTTCTAATATGTCACAAGACTCGCATAAAAATGGCCCTTCTTCTCCGATAGGTGAGGTGGTTTTGTCAGGTAGTAAATTCTTGTCACCAAATGTAAGTATGGCTGATTCTATTGACTGTTTGGATAATGTAACAAGAAGGCATTTCCCCCGACGACGAGTTTCAGCCACTAGAGACTTTCCTCCTTTTTGTGGACGAAATGCTCCTCGCCTTGGTAAGGATGATTGTTTAGAGGAGATCTCTTTTCTGGATAACAAAATCATGGGTCAACAGGACTTGGCTGTGGATGACAAGGAATTGAAAACGGTCACGGCCTCTGATGTGAAAGAATTGGAAAATAATGTTGAATGTACAGATGCTTGCAATCCAGTGAATATAGTTCAAGGTGATCTTGAAGGGAATGTTATGCAGGAAGTGAATAAGTTGGATGGATCTGGAGCATCTCCTGAGATGAATTTGCTACCAACAAATCCAGGAGATGAGGACGTTGCACTTCCTGATGGAAGCCATTGCCATCAGGCATTAACAAGTTCCCCAACAGTAGTTGAAGAAGAAAGCAGAGATGCTATACTGGTTGAGGGAACACTAGGAAAGGAGATGGTAGTTTATACAGGAGCTCAAGGCCTTGTGACAGAGCCTCTGGGTACATCTGCTTGGCATCATAAGTCAAAAGGAGATTTCAATGAATTGCAGGCTCCATCTTGCAGGATGGTTGTACTAGGCCTGATGTCTGCATCGACATGTCCTTGGAGGAACAGTATAGGTTTTCCGAAATCTAGAATGGTTGGTGGTAAAAATGAAATAAAGGGAAAGAAAATTGATAAAAATGAAAGAAAGGGAAAGAAAATTGGTTTTTTTGAACACTTTGACAGGTCCAAAGTTGCTACCAAGTCTAAAGACTCACCAAATTGTTCTGGGAAGAAGCCTGTAATAAAGAAAAAAGGAAGCTGTGCTGCTGAAGGTATGGGTCAACTGGTAGTTTGGGAGAATAAAGACTCTCTTGACTCAGATAAAAGTAAGGAAGAGACAAGTGTAGTCCCAAGATCTCGAGGTTTTGATGTTTACGTTCCTCCTTTTGGTCATGGAAATCTAAGTGGTAATGGCAAAGACTCAAATGTGACTCGAAATAAAGTGAGGGAGACATTGCGCCTTTTCCAAGCTGTTTCTAGAAAGCTATTGCAGGAGGAAGAAGCAAAGCCAAAAGACAAAGGGAACACTAATAGGAGGGGTAGGATTGATACAGTAGCAGCTAAGATCCTTAGGGATAAAGGGAAATATGTTAACACAGGGAAGCCGATCTTGGGACATGTCCCTGGGGTTGAAGTTGGTGATGAATTTCAGTACTGGGTGGAGCTTAATATTATTGGCCTTCATCGCCAGTCTCAGGGAGGCATAGATTATGTCATGCATAATGGTAAGACCCTTGCAACCAGTGTGGTTTCATCTAAGGGCTATGCTGATGAGTCGGGCAGTTCAGATGTATTGACTTATACAGGGCAGGGAGGAAGTATGTTAAAGAATGGTAAAGAACCTGAAGATCAGAAGCTCGAGAGGGGCAATCTTGCTTTGAAGAATAGTGTTACAGAAAAGAATCCTGTCAGGGTAATACGTGGCTGTGAATCAACAGATGGAAAAAGTCGGAGATATGTTTATGATGGGCTATATGAAGTTGAGGCTTATTGGCAGGAAGCGGGACCACATGGTAAGTTGGTTTTTAGATTTCGGATGCGAAGAATCCTAGGTCAACCAGAACTTGCTTGGAAAGAAGTGAAGGAATGCAAAAAATTCAAAAAAAGAGAGGGCGTATGTGTTGATGACATTTCTAATGGGAAAGAGCCAATTCCAATATGTGCTGTTAACACCATAGATGATGAAAACCCCCCACCATTTGAATACACAACCAGAATGATATATCCTAATTGGTGTAATCCTATTCCTCCAGAGGGATGTAGTTGTACAAATAGATGCTCTGACTCTGACAAATGTTCTTGTGCGGTAAAAAATGGGGTAGAGATCCCGTACAATCATAATGGGGCCATTGTAGAAGCAAAGCCTCTTGTGTTTGAGTGTAGTGCTTCTTGCAAGTGTCCTTCGACATGTCATAACAGAGTCAGCCAACATGGCATAAAATTTCAACTTGAAATTTTTAAAACCAAGACAAGAGGATGGGGTGTGAGATCCCTAAATTCCATCGCTTCAGGAAGTTTTATCTGTGAATACATAGGAGAGCTTCTTGAAGAGAAGGAAGCAGAACAAAGAACTGGTAATGATGAATATCTGTTTGACATCGGGAATAACGCCATCAATACTCTTTGGGATGGACTTTCAAGCCTAATGCCTGAGGCACAGTCAAGTTCTTGTGAAATCGTGGAAAATAGTGGCTTCACCATTGATGCTGCTCAGTATGGCAATGTTGGGAGATTTATCAACCATAGTTGCTCCCCTAATCTTTATGCTCAAAATGTTCTTTATGATCATGACGACAAGAGAATACCTCACATAATGTTTTTTGCTGCTGAAAATATTCCTCCTCTGCAAGAGCTGTGTTATGATTACAATTATATGATAGATCAAGTTCATGATTCTGATGGCAATATAAAGAGGAAGGACTGCTTTTGTGGTTCTGCAGAGTGTAATGGTAGGCTTGAACTGGATGAGACTGCCATGGGTCTATTTGATGGCAGTCTGCACAGACCTTGTTCACCCACTTATTGTGCCTTTTCTTGTGTCAAACAGAATGGCTTAAAGCCTTGTTACAAGTTGGCTTGCTGCTTTGGTGAATTTCTTCAAGTAAGTGTTCGAAATTTAAAAAGAGAAGCGATGCATGCAGACTATGGAGTCTGA 3360 0.4137 MENTLHSKSLTKVTSINNSNNDERSGKPWMENGHCTVPTQLKFKCRKVSSVRDYPEGCGRFAPRINLTPNVNTANVGIGEGTLVEDNSGEDIKDEFVRACEVEHESQHAVLVGLDSGTLGQSNHHSLKKEIPMVSSKIVDEPPLTNDETVKMGLVSLKDLESRRAAEAVNCDTSNMSQDSHKNGPSSPIGEVVLSGSKFLSPNVSMADSIDCLDNVTRRHFPRRRVSATRDFPPFCGRNAPRLGKDDCLEEISFLDNKIMGQQDLAVDDKELKTVTASDVKELENNVECTDACNPVNIVQGDLEGNVMQEVNKLDGSGASPEMNLLPTNPGDEDVALPDGSHCHQALTSSPTVVEEESRDAILVEGTLGKEMVVYTGAQGLVTEPLGTSAWHHKSKGDFNELQAPSCRMVVLGLMSASTCPWRNSIGFPKSRMVGGKNEIKGKKIDKNERKGKKIGFFEHFDRSKVATKSKDSPNCSGKKPVIKKKGSCAAEGMGQLVVWENKDSLDSDKSKEETSVVPRSRGFDVYVPPFGHGNLSGNGKDSNVTRNKVRETLRLFQAVSRKLLQEEEAKPKDKGNTNRRGRIDTVAAKILRDKGKYVNTGKPILGHVPGVEVGDEFQYWVELNIIGLHRQSQGGIDYVMHNGKTLATSVVSSKGYADESGSSDVLTYTGQGGSMLKNGKEPEDQKLERGNLALKNSVTEKNPVRVIRGCESTDGKSRRYVYDGLYEVEAYWQEAGPHGKLVFRFRMRRILGQPELAWKEVKECKKFKKREGVCVDDISNGKEPIPICAVNTIDDENPPPFEYTTRMIYPNWCNPIPPEGCSCTNRCSDSDKCSCAVKNGVEIPYNHNGAIVEAKPLVFECSASCKCPSTCHNRVSQHGIKFQLEIFKTKTRGWGVRSLNSIASGSFICEYIGELLEEKEAEQRTGNDEYLFDIGNNAINTLWDGLSSLMPEAQSSSCEIVENSGFTIDAAQYGNVGRFINHSCSPNLYAQNVLYDHDDKRIPHIMFFAAENIPPLQELCYDYNYMIDQVHDSDGNIKRKDCFCGSAECNGRLELDETAMGLFDGSLHRPCSPTYCAFSCVKQNGLKPCYKLACCFGEFLQVSVRNLKREAMHADYGV 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0491 1119 Pfam SET domain 894 1025 IPR001214 GO:0005515
Lele51g0491 1119 Gene3D - 589 770 IPR036987 -
Lele51g0491 1119 Pfam SAD/SRA domain 606 754 IPR003105 -
Lele51g0491 1119 SMART set_7 883 1031 IPR001214 GO:0005515
Lele51g0491 1119 SMART preset_2 776 867 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele51g0491 1119 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 114 1068 IPR025794 GO:0016571
Lele51g0491 1119 ProSiteProfiles YDG domain profile. 607 750 IPR003105 -
Lele51g0491 1119 ProSiteProfiles SET domain profile. 883 1025 IPR001214 GO:0005515
Lele51g0491 1119 SUPERFAMILY PUA domain-like 589 763 IPR015947 -
Lele51g0491 1119 Gene3D SET domain 771 1054 IPR046341 -
Lele51g0491 1119 ProSiteProfiles Pre-SET domain profile. 820 880 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele51g0491 1119 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 422 1049 - -
Lele51g0491 1119 SMART G9a_1 602 754 IPR003105 -
Lele51g0491 1119 SUPERFAMILY SET domain 766 1026 IPR046341 -
Lele51g0491 1119 Pfam Pre-SET motif 779 875 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele51g0491 1119 CDD SET_AtSUVH-like 800 1026 - -
Lele51g0491 1119 ProSiteProfiles Post-SET domain profile. 1039 1055 IPR003616 -
Lele51g0491 1119 MobiDBLite consensus disorder prediction 1 31 - -
Lele51g0491 1119 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0491 Lele-ChrLele51 2884773 2888432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0491 544 1054 Su(var)3-9 homologs AT5G04940 40.152 2.41e-114 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele51g0491 SAD_SRA 3.9e-47 CL0178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0474 49 2827144 2830966 Lele51g0491 51 2884773 2888432 hybridization
Lele50g0507 50 3016387 3017190 Lele51g0491 51 2884773 2888432 hybridization