Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0489 ATGGAACTTCATTCCAAATACCAACTAGGCCTTGTTTGTGTGATGGTGCTCTTACCTGCACTATGTACCTCCCAAGACTTTACACCCTCCAGAGCTACGATCCCAGAATTACCTGGATATTGCGGTGTAAACCCGAATGGAGCTTGTGGATATGGCGAATATGCTAGGTCTATGAACAACGGGAACGCTGTGGCCGTGCCTGGTGAGTTATGGAGGAATGGCGCTGGATGTGGTGCTTGCTACCAAGTAAGGTGTAAAGATCGCAAATACTGCGATGAACACGGCATAGTGGTAGTGGCAACAGACTACGCTGCAGAAAGCAAAACAGGCTTCGAAATCAGTCCATGTCTCTTAAAAAGACTGATACCTATCGACAAATACGGCATCGTAGACATCGAATACAGGAGGGCACCCTGCACATATGCAGGCTACAACGTGAAGATCAAGATCCACGAGTCCAGCAGATACCCAGATTATCTTGCTATTGTCCTTCTATACGTGCCTGGAATGAATGACGTCACTGCCGTTGAGATATATCAGAATGATAGTAAAGAATGGAGGCCAATGAGAAGAGAGTATGGGGCAGTGTTTGATATAGTGGGCGCACCAAGTGGACCATTGAAGCTGAGGCTGCAATTCAGTGGAAGAACTGGTTGGGTTCAGTCGACCAAGAGCGCTATTCCTGGAGATTGGAAGATTGGAGCTTCTTATGACTCTCAAGTTCATCTCTAA 732 0.4686 MELHSKYQLGLVCVMVLLPALCTSQDFTPSRATIPELPGYCGVNPNGACGYGEYARSMNNGNAVAVPGELWRNGAGCGACYQVRCKDRKYCDEHGIVVVATDYAAESKTGFEISPCLLKRLIPIDKYGIVDIEYRRAPCTYAGYNVKIKIHESSRYPDYLAIVLLYVPGMNDVTAVEIYQNDSKEWRPMRREYGAVFDIVGAPSGPLKLRLQFSGRTGWVQSTKSAIPGDWKIGASYDSQVHL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0489 243 Gene3D - 18 139 IPR036908 -
Lele51g0489 243 PRINTS Expansin/Lol pI family signature 67 85 IPR007118 GO:0005576
Lele51g0489 243 PRINTS Expansin/Lol pI family signature 186 200 IPR007118 GO:0005576
Lele51g0489 243 PRINTS Expansin/Lol pI family signature 225 239 IPR007118 GO:0005576
Lele51g0489 243 PRINTS Expansin/Lol pI family signature 45 63 IPR007118 GO:0005576
Lele51g0489 243 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 158 239 IPR007117 -
Lele51g0489 243 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 144 IPR007112 -
Lele51g0489 243 PANTHER EXPANSIN-B3 18 242 - -
Lele51g0489 243 SUPERFAMILY Barwin-like endoglucanases 13 143 IPR036908 -
Lele51g0489 243 Pfam Expansin C-terminal domain 146 228 IPR007117 -
Lele51g0489 243 SUPERFAMILY PHL pollen allergen 145 239 IPR036749 -
Lele51g0489 243 Gene3D - 140 240 IPR036749 -
Lele51g0489 243 SMART dpbb_1 63 134 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0489 Lele-ChrLele51 2879554 2880658 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0489 9 243 Expansin Gene Family AT4G17030 51.029 1.18e-77 233