Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0474 ATGGGTCGTAAACCTCACGACCCGGAGCTAACTCTGCCCAGTCGCTTGATCCCCCTTTTGGTTTGTTTGGTTTCGTGCGGTTTGGTCTACGCCTTCGTCTCTGTAGTGCTCACAAACACAGGGACCTCTTCCTTTTCAGAGTTGGTTGGAGATGGCGTGGCAATGGAGAAATCTGTGGAAGGTTCTGGGGGATGCTGTAGAGGAATTGAAAATCTGGAACTATGGGGAGCCGCCGTGAAGTGGGGTTCCCAGTTTAAATTTAACAAGTCCGAAGATTGTTGCAACGCTTGTAAATCCATGTGTACTGGGAAAGATGGGCCATGTCTCTGTGATTCGTGGGTTTTTTGTGGGAATCGTGAGACTTGCGGGTCCAAGTTCGGCGAGTGCTGGTTGAAGAAACAAAAGGACAGCTTGACCCCTGCACGACAAGATGCTGGAGAAAAAGTTAGTTGGACTTCCGGTCTCATCTTTGGAAAAGGAGAAGGTATCATTGAGTTGGAAACAGAACATGGAGCTCTTGGGGTCAAACTTTTCCCTGACTGTGCTCCACACTCAGTTGCATACATTCTAGAGTTGCTGGCTTTGCGCCATTGTGCTGGGTGCCAATTTTACCGTGCAGAAGGCCGAGGCCAATCCTGGGATTCAGAAGGAAACCACTTAAAAAATGCTCCTTTTGGCCCCCCTTCTGCATTAATTCAAGGAACCTTAGAAGCACAGGGAAACCCATTTAAGAAAATTCCAGTAGAAGACTGTCCAACAATAAGGAGGGGTTCAGTTGCTTGGGTTGATTCAGGACCAGAATTCTTCATAAGCCTTGCTAACCATGGGGAGTGGAGAAAGGCGTACACAGTTTTCGGTTCTGTTCTTCCAGAAGACATGAGTATAGCCGAGAAAATTGCCGCACTACCCACAGTTTCCGATGCTTGGAAGAATATTAATGTTTCTGTCTTGGAAAAGCCTGTTCCCTTGTTGCTACGAAGAATCCAGAAAAGCCTTGCAGATTAA 1005 0.4726 MGRKPHDPELTLPSRLIPLLVCLVSCGLVYAFVSVVLTNTGTSSFSELVGDGVAMEKSVEGSGGCCRGIENLELWGAAVKWGSQFKFNKSEDCCNACKSMCTGKDGPCLCDSWVFCGNRETCGSKFGECWLKKQKDSLTPARQDAGEKVSWTSGLIFGKGEGIIELETEHGALGVKLFPDCAPHSVAYILELLALRHCAGCQFYRAEGRGQSWDSEGNHLKNAPFGPPSALIQGTLEAQGNPFKKIPVEDCPTIRRGSVAWVDSGPEFFISLANHGEWRKAYTVFGSVLPEDMSIAEKIAALPTVSDAWKNINVSVLEKPVPLLLRRIQKSLAD 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0474 334 SUPERFAMILY Cyclophilin-like 159 316 IPR029000 -
Lele51g0474 334 FunFam Predicted protein 159 322 - -
Lele51g0474 334 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 164 307 IPR002130 GO:0000413|GO:0003755
Lele51g0474 334 Gene3D - 157 320 IPR029000 -
Lele51g0474 334 PANTHER EXPRESSED PROTEIN 1 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0474 Lele-ChrLele51 2795009 2797202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0474 159 289 U-box Gene Family AT5G67530 26.471 2.74e-06 47.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0474 51 2795009 2797202 Lele51g0474 51 2795009 2797202 ECH
Lele49g0456 49 2747074 2749118 Lele51g0474 51 2795009 2797202 hybridization
Lele50g0492 50 2917430 2919673 Lele51g0474 51 2795009 2797202 hybridization