Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0473 ATGGGCTGTAGACGCACAACCCCACCTAATCATGAATCAATAAATCGTCATGCGCGTGTCGGTGTGCGATCTTCGAAGAAGCTTGTGAGGGTGGACATGGAGGAACGGTATGAGCCATTGAAAGACCTTGGTTCTGGGAATTTCGGAGTGGCCAGGTTGGTGAGAGACAAGATCACAAAAGAGCTTGTTGCGGTCAAGTACATAGAAAGAGGGAAGAAGATTGACGAGAAAGTTCAGAGGGAGATCATTAACCACCGATCTTTAAGGCATCCAAATATTATCAAGTTTAGAGAGGTTTTGCTGACACCAACCCATTTAGCCATTGTCATGGAGTATGCTGCAGGAGGTGAACTCTTTGAGAGAATATGCAATGCGGGTCGATTCAGTGAAGATGAGGCGAGATTTTTCTTCCAGCAACTAATATCTGGAGTTAGCTACTGTCACTCAATGCAAATTTGTCACAGAGATTTGAAATTGGAAAACACTCTCTTGGATGGAAGTCCAACACCTCGACTCAAAATATGTGACTTCGGTTACTCCAAGTCTGCTATACTGCACTCTCAACCGAAATCTACTGTCGGAACTCCTGCTTACATTGCTCCGGAGGTTCTGTCACGAAAGGAGTACGATGGAAAGATTGCGGATGTTTGGTCTTGTGGTGTAACGCTTTATGTCATGTTAGTGGGAGGATACCCATTTGAAGATCCTGAAGATCCTAGGAATTTCCGAAAGACCATTGGAAGAATAATGGGTGTTCAATACTCCATTCCCGACTATGTACGTGTCTCTGCAGATTGCAGACATCTTCTTTCTCGCATCTTTGTCGCCAATCCTGCCAAAAGGATAACGATCTCAGAGATAAAACAACACCCTTGGTTTTTGAAGAACTTGTCTAAAGAGATAAAAGGAGCTGAGAAAAAAGTCAATGATGAGGAAGCGGAGAAAGATCATTTGAGCCAGAGTGTTGAAGAAATAATGCGAATAGTGCAAGAGGCAATGACCCCGGGGAAAGATTCTAAGGGTGGCACCGGAGGGCAAGGTGGTGAAGGAGGATCATTGGACGGTGAGGATCACGATGAAGAATTAGAACTTGATGTTAGTGGAGACTATGCTACAACAACATAG 1125 0.4427 MGCRRTTPPNHESINRHARVGVRSSKKLVRVDMEERYEPLKDLGSGNFGVARLVRDKITKELVAVKYIERGKKIDEKVQREIINHRSLRHPNIIKFREVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPTPRLKICDFGYSKSAILHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGGYPFEDPEDPRNFRKTIGRIMGVQYSIPDYVRVSADCRHLLSRIFVANPAKRITISEIKQHPWFLKNLSKEIKGAEKKVNDEEAEKDHLSQSVEEIMRIVQEAMTPGKDSKGGTGGQGGEGGSLDGEDHDEELELDVSGDYATTT 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0473 374 ProSitePatterns Protein kinases ATP-binding region signature. 43 66 IPR017441 GO:0005524
Lele51g0473 374 ProSiteProfiles Protein kinase domain profile. 37 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g0473 374 CDD STKc_SnRK2 36 292 - -
Lele51g0473 374 Pfam Protein kinase domain 37 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g0473 374 Coils Coil 294 321 - -
Lele51g0473 374 FunFam Serine/threonine-protein kinase SRK2E 113 301 - -
Lele51g0473 374 SUPERFAMILY Protein kinase-like (PK-like) 20 299 IPR011009 -
Lele51g0473 374 Gene3D Phosphorylase Kinase; domain 1 17 112 - -
Lele51g0473 374 Gene3D Transferase(Phosphotransferase) domain 1 113 301 - -
Lele51g0473 374 MobiDBLite consensus disorder prediction 329 374 - -
Lele51g0473 374 SMART serkin_6 37 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g0473 374 FunFam Serine/threonine-protein kinase SRK2E 32 112 - -
Lele51g0473 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Lele51g0473 374 PANTHER SERINE/THREONINE KINASE 35 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0473 Lele-ChrLele51 2790287 2793491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0473 36 298 CBL-interacting serine-threonine protein kinases AT4G24400 43.015 4.93e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lele51g0473 Pkinase 4.1e-71 CL0016