Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0434 ATGGGTTGTTTAAACTCTAAAACAGCTCATCTTCACTCCCCTGACGAGCCCTCCGCCTTCCCTGACGCCAACAAACCTGATTCAGCTAATGGGGATGATGTTGATCAAGAATGTCAAGTCCAAGCATTCAAAGAGTTCGGTCTCAATGAACTCCGAAGGGCTACGAACGAGTTCAGCACAAATTACATAGTGTCGGAAAGTGGCGAGAAAGCTCCCAATGTGGTCTACAAAGGGAAGCTCGAGAATAATCGCTTAGTCGCTATTAAACGCTTCTCTAAACAGTCTTGGCCAGACGCTCAGCAGTTTATGGCAGAGGCAGCTGGAGTTGGTAAAGTGAGGCACAAGAGACTGGTGAATCTAATTGGTTGCTGTGCTGAAGGAGACGAACGGCTTTTGGTGGCAGAGTACATGCCAAACGATACATTATCAAAGCATCTCTTTCATTGGGACAAGCAGCCATTGCCATGGGAAATGCGTGTTAGAGTTGCATATCATGTAGCGCAGGCACTGGATCATTGTAGCATGGAAAATCGCAAAATATATCATGATTTGAATGCATACAGGATTCTTTTTGATGAGGAAGGTGACCCCCGATTGTCAAGTTTCGGGCTTATGAAAAATAGTCGAGATGGGAAAAGCTACAGTACCAACTTAGCATATACTCCACCTGAGTTTTTGCGGACAGGCAGGATTATTCCAGAGAGTGTAATCTACAGTTATGGAACAGTTCTTTTGGATCTTTTGAGCGGCAAGCATATTCCTCCAAGCCATTTTGAGGCTAGAGAACGCCCAGATATTAAGTTTCTTCTTGCAGCAGTTGCACCTCTTCAAAAGCAGAAAGAGGTAGCATCTCATGTGTTGATGGGCCTGACTAAAAATACAGCAGTGCTACCAACCATGCTTTCACCCCTAGGAAAGGCTTGTGCAAGGATGGATCTCACAGCTGTGCATGATATATTGCTAAAAACGGGTTATAAAGATGAAGAAGGTGCTGAGAATGAGCTTTCATTCCAAGAGTGGACACAACAAGTGCAAGATATCTTGAACACAAAAAAATATGGGGATATTGCATTCAGAGACAAGGATTTCAAGAACGCAATTGAGTATTATTCTAAGTTGGTGGTGATGATGTCCGTTCCTTCCGCTACCGTATTCGCGAGAAGAGCTTTCTCATACTTGATAAACGAGCAGGCTGAGCTGGCGCTACGGGATGCGATGCAGGCACAGGTGTGCATTCCTGATTGGCCTACAGCATTCTACCTGCAGGCACTTGCTCTATCGAAGCTGGGAATGGAGACTGATGCTCAGGACATGCTTAATGATGGAGCTGGCTTTGAAGCCAAGAGGGAGCAGAAGTTAGACGCGTTCCTAAATTTCAAACTTCAAAGGCTAAATCCTAAAGGAAGAAGAGAAAGTTATATGGATAACAAATCACCGAGCAAGGCCGCTAAGGAGGTTGCACGTGAGTTGCTCATCGCTATCTCTAACTCTTTGCCAGATAAGGTTGTGGAGTCAAATTGTGGATCTGAAATTAAGAAAACGGATGGAGTTGTAGTGGCAAACGGTGATGTAGATGACAAGTTTCGATCTGAACTGATTTCTATCTCATACTCAGAATCCCCTGACATCGAAATCTGA 1638 0.4451 MGCLNSKTAHLHSPDEPSAFPDANKPDSANGDDVDQECQVQAFKEFGLNELRRATNEFSTNYIVSESGEKAPNVVYKGKLENNRLVAIKRFSKQSWPDAQQFMAEAAGVGKVRHKRLVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSMENRKIYHDLNAYRILFDEEGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVIYSYGTVLLDLLSGKHIPPSHFEARERPDIKFLLAAVAPLQKQKEVASHVLMGLTKNTAVLPTMLSPLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKYGDIAFRDKDFKNAIEYYSKLVVMMSVPSATVFARRAFSYLINEQAELALRDAMQAQVCIPDWPTAFYLQALALSKLGMETDAQDMLNDGAGFEAKREQKLDAFLNFKLQRLNPKGRRESYMDNKSPSKAAKEVARELLIAISNSLPDKVVESNCGSEIKKTDGVVVANGDVDDKFRSELISISYSESPDIEI 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0434 545 Gene3D Tetratricopeptide repeat domain 345 458 IPR011990 GO:0005515
Lele51g0434 545 SUPERFAMILY Protein kinase-like (PK-like) 45 259 IPR011009 -
Lele51g0434 545 Gene3D Phosphorylase Kinase; domain 1 32 136 - -
Lele51g0434 545 FunFam probable serine/threonine-protein kinase At4g35230 33 136 - -
Lele51g0434 545 MobiDBLite consensus disorder prediction 1 34 - -
Lele51g0434 545 FunFam probable serine/threonine-protein kinase At4g35230 345 454 - -
Lele51g0434 545 SUPERFAMILY TPR-like 346 440 IPR011990 GO:0005515
Lele51g0434 545 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 25 257 IPR045845 GO:0004672|GO:0009742
Lele51g0434 545 ProSiteProfiles Protein kinase domain profile. 61 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g0434 545 Pfam Protein tyrosine and serine/threonine kinase 74 257 IPR001245 GO:0004672|GO:0006468
Lele51g0434 545 Gene3D Transferase(Phosphotransferase) domain 1 138 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0434 Lele-ChrLele51 2508594 2515129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0434 14 253 Glycoside Hydrolase AT3G07070 35.857 7.64e-38 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lele51g0434 PK_Tyr_Ser-Thr 3.2e-25 CL0016