Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0428 ATGGTCCTGAGATTTCATGCAGCCTTAGAAATGGCAATGGCAGGGAACGAGAATGGCAGAACCACTGGGGATTGGAAGAAGCGTGTTCATATAGTTGGTGAGAAACTGAAGAGGCTTCCGAGTTTGGCTTGGCAAACCATGTGGAAGGTGGGACGCGAAGACCCCAGAAGGGTGGTTCATGCTTTAAAAGTGGGGTTGTCTCTAACTCTTGTTTCTCTGCTGTATCTGGTGGAGCCACTGTTCAAAGGGATTGGAAAGAATGCTATTATAGCTGTAATGACTGTGGTGGTTGTGCTTGAGTTCACAGCAGGCCAGTTTCTCTCGATTGGGGCAACATTATGCAAAGGTCTGAACAGAGGATTGGGAACCCTTCTGGCAGGATTATTAGCATTGCTTATTCAGTATATTGCAAAATCATCAGGCCATGTCTTCAAAGCTATTTCTATTGGAGCTGTTGTTTTTCTTACAGGAGCTGCTGCTACTTATATGAGGTTCTTTCCCCACATAAAGAAGAACTATGACTATGGTGCAGTGATATTTCTCTTGACCTTTAATCTGATAACCGTGTCGAGCTACCGAGTTGACAATGTCTTGACCATTGCACACGATCGCTTGGTCACCATAGTCATAGGCTGTGGCATCTGCCTTCTCATGAGTCTATTGATATTTCCAAATTGGTCAGGCGAAGACCTTCATAATTCCACAGTTTTCAAGCTTGAAGGCCTAGCCAATTCTATAGAAGTGTGTGTCAATGAATACTTCTATGGTAAAATGGAAGCAAGTGAACACATAAAATCGTCCGAGGATCCTATTTACAAAGGTTATAAGGCAGTTCTGGATTCAAAATCTACTGATGAAACACTGGCAAGACATCTATTTCCATGTAAGCAGTATGTGAAAGTTGGAACTGTTCTTCGTCAATTTGGCTACACTGTGGTTGCTTTGCATGGTTGTTTAAGAACTGAAATTCAGACACCACGATCTGTCCGAGCCCTGTTCAAGGATCCATGCATACGGCTTGCTGCAGAGGTGTCAAAAGTACTGATAGAACTAGCCAACAGCATAAGGAATCGTCGCCATTGCTCACCGGAAATACTCTCCGATCATCTGCATGAAGCCTTAAAAGACCTCAACACTGCAATAAAATCTCAGCCTCGTATCTTTTTGGGATCCAGTAATAGCCGAGCAACCAAGATGTTTGCTATAGCTGCAGCACAGGCAGGGCAGAAAATACAGAAACGCAACAATGGAGTTTCACTGTCAAGTGTTAAAACAGACTCTTCGGCATTGCTGGAATGGAAAACTGAAAGGGTTTCTGCTGATCAGTCAAAGGATTCAGAACGAAAGTCTTTAAGACCCCAACTAAGTAAAATCGCGATCACTAGCCTTGAGTTCTCTGAAGCTCTTCCTTTTGCTGCTTTTGCTTCATTGCTGGTGGAGACAGTTGCAAAATTGGACTTTGTTATAGAGGAAGTTGAAGAACTGGGCAGATTAGCTTGCTTCAAAGAGTTCAAACCCGATGATGATGAGGTTGTTGTCACCTGTGAGAAACCCCGTGTTCATGTGACTCAAAACCATTTACCTTCTCACGGAGTAGATTGA 1602 0.4345 MVLRFHAALEMAMAGNENGRTTGDWKKRVHIVGEKLKRLPSLAWQTMWKVGREDPRRVVHALKVGLSLTLVSLLYLVEPLFKGIGKNAIIAVMTVVVVLEFTAGQFLSIGATLCKGLNRGLGTLLAGLLALLIQYIAKSSGHVFKAISIGAVVFLTGAAATYMRFFPHIKKNYDYGAVIFLLTFNLITVSSYRVDNVLTIAHDRLVTIVIGCGICLLMSLLIFPNWSGEDLHNSTVFKLEGLANSIEVCVNEYFYGKMEASEHIKSSEDPIYKGYKAVLDSKSTDETLARHLFPCKQYVKVGTVLRQFGYTVVALHGCLRTEIQTPRSVRALFKDPCIRLAAEVSKVLIELANSIRNRRHCSPEILSDHLHEALKDLNTAIKSQPRIFLGSSNSRATKMFAIAAAQAGQKIQKRNNGVSLSSVKTDSSALLEWKTERVSADQSKDSERKSLRPQLSKIAITSLEFSEALPFAAFASLLVETVAKLDFVIEEVEELGRLACFKEFKPDDDEVVVTCEKPRVHVTQNHLPSHGVD 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0428 533 Pfam Aluminium activated malate transporter 48 496 IPR020966 GO:0015743
Lele51g0428 533 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 36 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0428 Lele-ChrLele51 2468466 2470590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0428 34 518 Miscellaneous Gene Families AT4G17970 62.430 0.0 635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0428 51 2468466 2470590 Lele53g0258 53 2144646 2149042 CCT
Lele51g0428 51 2468466 2470590 Lele54g0262 54 2214082 2218513 CCT
Lele51g0428 51 2468466 2470590 Lele56g1174 56 15207853 15208398 CCT
Lele51g0428 51 2468466 2470590 Lele51g0428 51 2468466 2470590 ECH
Lele49g0417 49 2420630 2422786 Lele51g0428 51 2468466 2470590 hybridization
Lele50g0446 50 2560880 2563009 Lele51g0428 51 2468466 2470590 hybridization